Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae

The International Committee on Systematics of Prokaryotes (ICSP) discussed and rejected in 2020 a proposal to modify the International Code of Nomenclature of Prokaryotes to allow the use of gene sequences as type for naming prokaryotes. An alternative nomenclatural code, the Code of Nomenclature of...

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Autores principales: Greub, Gilbert, Pillonel, Trestan, Bavoil, Patrik M., Borel, Nicole, Campbell, Lee Ann, Dean, Deborah, Hefty, Scott, Horn, Matthias, Morré, Servaas A., Ouellette, Scot P., Pannekoek, Yvonne, Puolakkainen, Mirja, Timms, Peter, Valdivia, Raphael, Vanrompay, Daisy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Original Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320375/
https://www.ncbi.nlm.nih.gov/pubmed/37416863
http://dx.doi.org/10.1016/j.nmni.2023.101158
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author Greub, Gilbert
Pillonel, Trestan
Bavoil, Patrik M.
Borel, Nicole
Campbell, Lee Ann
Dean, Deborah
Hefty, Scott
Horn, Matthias
Morré, Servaas A.
Ouellette, Scot P.
Pannekoek, Yvonne
Puolakkainen, Mirja
Timms, Peter
Valdivia, Raphael
Vanrompay, Daisy
author_facet Greub, Gilbert
Pillonel, Trestan
Bavoil, Patrik M.
Borel, Nicole
Campbell, Lee Ann
Dean, Deborah
Hefty, Scott
Horn, Matthias
Morré, Servaas A.
Ouellette, Scot P.
Pannekoek, Yvonne
Puolakkainen, Mirja
Timms, Peter
Valdivia, Raphael
Vanrompay, Daisy
author_sort Greub, Gilbert
collection PubMed
description The International Committee on Systematics of Prokaryotes (ICSP) discussed and rejected in 2020 a proposal to modify the International Code of Nomenclature of Prokaryotes to allow the use of gene sequences as type for naming prokaryotes. An alternative nomenclatural code, the Code of Nomenclature of Prokaryotes Described from Sequence Data (SeqCode), which considers genome sequences as type material for naming species, was published in 2022. Members of the ICSP subcommittee for the taxonomy of the phylum Chlamydiae (Chlamydiota) consider that the use of gene sequences as type would benefit the taxonomy of microorganisms that are difficult to culture such as the chlamydiae and other strictly intracellular bacteria. We recommend the registration of new names of uncultured prokaryotes in the SeqCode registry.
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spelling pubmed-103203752023-07-06 Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae Greub, Gilbert Pillonel, Trestan Bavoil, Patrik M. Borel, Nicole Campbell, Lee Ann Dean, Deborah Hefty, Scott Horn, Matthias Morré, Servaas A. Ouellette, Scot P. Pannekoek, Yvonne Puolakkainen, Mirja Timms, Peter Valdivia, Raphael Vanrompay, Daisy New Microbes New Infect Original Article The International Committee on Systematics of Prokaryotes (ICSP) discussed and rejected in 2020 a proposal to modify the International Code of Nomenclature of Prokaryotes to allow the use of gene sequences as type for naming prokaryotes. An alternative nomenclatural code, the Code of Nomenclature of Prokaryotes Described from Sequence Data (SeqCode), which considers genome sequences as type material for naming species, was published in 2022. Members of the ICSP subcommittee for the taxonomy of the phylum Chlamydiae (Chlamydiota) consider that the use of gene sequences as type would benefit the taxonomy of microorganisms that are difficult to culture such as the chlamydiae and other strictly intracellular bacteria. We recommend the registration of new names of uncultured prokaryotes in the SeqCode registry. Elsevier 2023-06-21 /pmc/articles/PMC10320375/ /pubmed/37416863 http://dx.doi.org/10.1016/j.nmni.2023.101158 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Original Article
Greub, Gilbert
Pillonel, Trestan
Bavoil, Patrik M.
Borel, Nicole
Campbell, Lee Ann
Dean, Deborah
Hefty, Scott
Horn, Matthias
Morré, Servaas A.
Ouellette, Scot P.
Pannekoek, Yvonne
Puolakkainen, Mirja
Timms, Peter
Valdivia, Raphael
Vanrompay, Daisy
Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae
title Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae
title_full Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae
title_fullStr Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae
title_full_unstemmed Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae
title_short Use of gene sequences as type for naming prokaryotes: Recommendations of the international committee on the taxonomy of chlamydiae
title_sort use of gene sequences as type for naming prokaryotes: recommendations of the international committee on the taxonomy of chlamydiae
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320375/
https://www.ncbi.nlm.nih.gov/pubmed/37416863
http://dx.doi.org/10.1016/j.nmni.2023.101158
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