Cargando…

Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp

African swine fever virus (ASFV) is an important animal pathogen that is causing a current African swine fever pandemic and affecting pork industry globally. ASFV encodes at least 150 proteins, and the functions of many of them remain to be clarified. The ASFV protein E301R (pE301R) was predicted to...

Descripción completa

Detalles Bibliográficos
Autores principales: Wu, Jiqin, Zheng, Haixue, Gong, Peng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Biochemistry and Molecular Biology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320598/
https://www.ncbi.nlm.nih.gov/pubmed/37257822
http://dx.doi.org/10.1016/j.jbc.2023.104872
_version_ 1785068476396732416
author Wu, Jiqin
Zheng, Haixue
Gong, Peng
author_facet Wu, Jiqin
Zheng, Haixue
Gong, Peng
author_sort Wu, Jiqin
collection PubMed
description African swine fever virus (ASFV) is an important animal pathogen that is causing a current African swine fever pandemic and affecting pork industry globally. ASFV encodes at least 150 proteins, and the functions of many of them remain to be clarified. The ASFV protein E301R (pE301R) was predicted to be a DNA sliding clamp protein homolog working as a DNA replication processivity factor. However, structural evidence was lacking to support the existence of a ring-shaped sliding clamp in large eukaryotic DNA viruses. Here, we have solved a high-resolution crystal structure of pE301R and identified a canonical ring-shaped clamp comprising a pE301R trimer. Interestingly, this complete-toroidal structure is different from those of the monomeric clamp protein homolog, herpes simplex virus UL42, and the C-shaped dimeric human cytomegalovirus UL44, but highly homologous to that of the eukaryotic clamp homolog proliferating cell nuclear antigen. Moreover, pE301R has a unique N-terminal extension that is important in maintaining the trimeric form of the protein in solution, while specific features in length and surface electrostatic potential of its interdomain connector implies specificity in interactions with binding partners such as the viral DNA polymerase. Thus, our data pave the way for further dissection of the processivity clamp protein structural and functional diversity and ASFV DNA replication mechanisms.
format Online
Article
Text
id pubmed-10320598
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher American Society for Biochemistry and Molecular Biology
record_format MEDLINE/PubMed
spelling pubmed-103205982023-07-06 Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp Wu, Jiqin Zheng, Haixue Gong, Peng J Biol Chem Research Article African swine fever virus (ASFV) is an important animal pathogen that is causing a current African swine fever pandemic and affecting pork industry globally. ASFV encodes at least 150 proteins, and the functions of many of them remain to be clarified. The ASFV protein E301R (pE301R) was predicted to be a DNA sliding clamp protein homolog working as a DNA replication processivity factor. However, structural evidence was lacking to support the existence of a ring-shaped sliding clamp in large eukaryotic DNA viruses. Here, we have solved a high-resolution crystal structure of pE301R and identified a canonical ring-shaped clamp comprising a pE301R trimer. Interestingly, this complete-toroidal structure is different from those of the monomeric clamp protein homolog, herpes simplex virus UL42, and the C-shaped dimeric human cytomegalovirus UL44, but highly homologous to that of the eukaryotic clamp homolog proliferating cell nuclear antigen. Moreover, pE301R has a unique N-terminal extension that is important in maintaining the trimeric form of the protein in solution, while specific features in length and surface electrostatic potential of its interdomain connector implies specificity in interactions with binding partners such as the viral DNA polymerase. Thus, our data pave the way for further dissection of the processivity clamp protein structural and functional diversity and ASFV DNA replication mechanisms. American Society for Biochemistry and Molecular Biology 2023-05-29 /pmc/articles/PMC10320598/ /pubmed/37257822 http://dx.doi.org/10.1016/j.jbc.2023.104872 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Wu, Jiqin
Zheng, Haixue
Gong, Peng
Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp
title Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp
title_full Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp
title_fullStr Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp
title_full_unstemmed Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp
title_short Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp
title_sort crystal structure of african swine fever virus pe301r reveals a ring-shaped trimeric dna sliding clamp
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320598/
https://www.ncbi.nlm.nih.gov/pubmed/37257822
http://dx.doi.org/10.1016/j.jbc.2023.104872
work_keys_str_mv AT wujiqin crystalstructureofafricanswinefeverviruspe301rrevealsaringshapedtrimericdnaslidingclamp
AT zhenghaixue crystalstructureofafricanswinefeverviruspe301rrevealsaringshapedtrimericdnaslidingclamp
AT gongpeng crystalstructureofafricanswinefeverviruspe301rrevealsaringshapedtrimericdnaslidingclamp