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Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp
African swine fever virus (ASFV) is an important animal pathogen that is causing a current African swine fever pandemic and affecting pork industry globally. ASFV encodes at least 150 proteins, and the functions of many of them remain to be clarified. The ASFV protein E301R (pE301R) was predicted to...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society for Biochemistry and Molecular Biology
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320598/ https://www.ncbi.nlm.nih.gov/pubmed/37257822 http://dx.doi.org/10.1016/j.jbc.2023.104872 |
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author | Wu, Jiqin Zheng, Haixue Gong, Peng |
author_facet | Wu, Jiqin Zheng, Haixue Gong, Peng |
author_sort | Wu, Jiqin |
collection | PubMed |
description | African swine fever virus (ASFV) is an important animal pathogen that is causing a current African swine fever pandemic and affecting pork industry globally. ASFV encodes at least 150 proteins, and the functions of many of them remain to be clarified. The ASFV protein E301R (pE301R) was predicted to be a DNA sliding clamp protein homolog working as a DNA replication processivity factor. However, structural evidence was lacking to support the existence of a ring-shaped sliding clamp in large eukaryotic DNA viruses. Here, we have solved a high-resolution crystal structure of pE301R and identified a canonical ring-shaped clamp comprising a pE301R trimer. Interestingly, this complete-toroidal structure is different from those of the monomeric clamp protein homolog, herpes simplex virus UL42, and the C-shaped dimeric human cytomegalovirus UL44, but highly homologous to that of the eukaryotic clamp homolog proliferating cell nuclear antigen. Moreover, pE301R has a unique N-terminal extension that is important in maintaining the trimeric form of the protein in solution, while specific features in length and surface electrostatic potential of its interdomain connector implies specificity in interactions with binding partners such as the viral DNA polymerase. Thus, our data pave the way for further dissection of the processivity clamp protein structural and functional diversity and ASFV DNA replication mechanisms. |
format | Online Article Text |
id | pubmed-10320598 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Society for Biochemistry and Molecular Biology |
record_format | MEDLINE/PubMed |
spelling | pubmed-103205982023-07-06 Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp Wu, Jiqin Zheng, Haixue Gong, Peng J Biol Chem Research Article African swine fever virus (ASFV) is an important animal pathogen that is causing a current African swine fever pandemic and affecting pork industry globally. ASFV encodes at least 150 proteins, and the functions of many of them remain to be clarified. The ASFV protein E301R (pE301R) was predicted to be a DNA sliding clamp protein homolog working as a DNA replication processivity factor. However, structural evidence was lacking to support the existence of a ring-shaped sliding clamp in large eukaryotic DNA viruses. Here, we have solved a high-resolution crystal structure of pE301R and identified a canonical ring-shaped clamp comprising a pE301R trimer. Interestingly, this complete-toroidal structure is different from those of the monomeric clamp protein homolog, herpes simplex virus UL42, and the C-shaped dimeric human cytomegalovirus UL44, but highly homologous to that of the eukaryotic clamp homolog proliferating cell nuclear antigen. Moreover, pE301R has a unique N-terminal extension that is important in maintaining the trimeric form of the protein in solution, while specific features in length and surface electrostatic potential of its interdomain connector implies specificity in interactions with binding partners such as the viral DNA polymerase. Thus, our data pave the way for further dissection of the processivity clamp protein structural and functional diversity and ASFV DNA replication mechanisms. American Society for Biochemistry and Molecular Biology 2023-05-29 /pmc/articles/PMC10320598/ /pubmed/37257822 http://dx.doi.org/10.1016/j.jbc.2023.104872 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Wu, Jiqin Zheng, Haixue Gong, Peng Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp |
title | Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp |
title_full | Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp |
title_fullStr | Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp |
title_full_unstemmed | Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp |
title_short | Crystal structure of African swine fever virus pE301R reveals a ring-shaped trimeric DNA sliding clamp |
title_sort | crystal structure of african swine fever virus pe301r reveals a ring-shaped trimeric dna sliding clamp |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10320598/ https://www.ncbi.nlm.nih.gov/pubmed/37257822 http://dx.doi.org/10.1016/j.jbc.2023.104872 |
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