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Evaluating clinical diversity and plausibility of synthetic capsule endoscopic images

Wireless Capsule Endoscopy (WCE) is being increasingly used as an alternative imaging modality for complete and non-invasive screening of the gastrointestinal tract. Although this is advantageous in reducing unnecessary hospital admissions, it also demands that a WCE diagnostic protocol be in place...

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Autores principales: Vats, Anuja, Pedersen, Marius, Mohammed, Ahmed, Hovde, Øistein
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10322862/
https://www.ncbi.nlm.nih.gov/pubmed/37407635
http://dx.doi.org/10.1038/s41598-023-36883-x
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author Vats, Anuja
Pedersen, Marius
Mohammed, Ahmed
Hovde, Øistein
author_facet Vats, Anuja
Pedersen, Marius
Mohammed, Ahmed
Hovde, Øistein
author_sort Vats, Anuja
collection PubMed
description Wireless Capsule Endoscopy (WCE) is being increasingly used as an alternative imaging modality for complete and non-invasive screening of the gastrointestinal tract. Although this is advantageous in reducing unnecessary hospital admissions, it also demands that a WCE diagnostic protocol be in place so larger populations can be effectively screened. This calls for training and education protocols attuned specifically to this modality. Like training in other modalities such as traditional endoscopy, CT, MRI, etc., a WCE training protocol would require an atlas comprising of a large corpora of images that show vivid descriptions of pathologies, ideally observed over a period of time. Since such comprehensive atlases are presently lacking in WCE, in this work, we propose a deep learning method for utilizing already available studies across different institutions for the creation of a realistic WCE atlas using StyleGAN. We identify clinically relevant attributes in WCE such that synthetic images can be generated with selected attributes on cue. Beyond this, we also simulate several disease progression scenarios. The generated images are evaluated for realism and plausibility through three subjective online experiments with the participation of eight gastroenterology experts from three geographical locations and a variety of years of experience. The results from the experiments indicate that the images are highly realistic and the disease scenarios plausible. The images comprising the atlas are available publicly for use in training applications as well as supplementing real datasets for deep learning.
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spelling pubmed-103228622023-07-07 Evaluating clinical diversity and plausibility of synthetic capsule endoscopic images Vats, Anuja Pedersen, Marius Mohammed, Ahmed Hovde, Øistein Sci Rep Article Wireless Capsule Endoscopy (WCE) is being increasingly used as an alternative imaging modality for complete and non-invasive screening of the gastrointestinal tract. Although this is advantageous in reducing unnecessary hospital admissions, it also demands that a WCE diagnostic protocol be in place so larger populations can be effectively screened. This calls for training and education protocols attuned specifically to this modality. Like training in other modalities such as traditional endoscopy, CT, MRI, etc., a WCE training protocol would require an atlas comprising of a large corpora of images that show vivid descriptions of pathologies, ideally observed over a period of time. Since such comprehensive atlases are presently lacking in WCE, in this work, we propose a deep learning method for utilizing already available studies across different institutions for the creation of a realistic WCE atlas using StyleGAN. We identify clinically relevant attributes in WCE such that synthetic images can be generated with selected attributes on cue. Beyond this, we also simulate several disease progression scenarios. The generated images are evaluated for realism and plausibility through three subjective online experiments with the participation of eight gastroenterology experts from three geographical locations and a variety of years of experience. The results from the experiments indicate that the images are highly realistic and the disease scenarios plausible. The images comprising the atlas are available publicly for use in training applications as well as supplementing real datasets for deep learning. Nature Publishing Group UK 2023-07-05 /pmc/articles/PMC10322862/ /pubmed/37407635 http://dx.doi.org/10.1038/s41598-023-36883-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Vats, Anuja
Pedersen, Marius
Mohammed, Ahmed
Hovde, Øistein
Evaluating clinical diversity and plausibility of synthetic capsule endoscopic images
title Evaluating clinical diversity and plausibility of synthetic capsule endoscopic images
title_full Evaluating clinical diversity and plausibility of synthetic capsule endoscopic images
title_fullStr Evaluating clinical diversity and plausibility of synthetic capsule endoscopic images
title_full_unstemmed Evaluating clinical diversity and plausibility of synthetic capsule endoscopic images
title_short Evaluating clinical diversity and plausibility of synthetic capsule endoscopic images
title_sort evaluating clinical diversity and plausibility of synthetic capsule endoscopic images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10322862/
https://www.ncbi.nlm.nih.gov/pubmed/37407635
http://dx.doi.org/10.1038/s41598-023-36883-x
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