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Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy
OBJECTIVE: To develop a deep learning algorithm for anatomy recognition in thoracoscopic video frames from robot-assisted minimally invasive esophagectomy (RAMIE) procedures using deep learning. BACKGROUND: RAMIE is a complex operation with substantial perioperative morbidity and a considerable lear...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10322962/ https://www.ncbi.nlm.nih.gov/pubmed/36947221 http://dx.doi.org/10.1007/s00464-023-09990-z |
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author | den Boer, R. B. Jaspers, T. J. M. de Jongh, C. Pluim, J. P. W. van der Sommen, F. Boers, T. van Hillegersberg, R. Van Eijnatten, M. A. J. M. Ruurda, J. P. |
author_facet | den Boer, R. B. Jaspers, T. J. M. de Jongh, C. Pluim, J. P. W. van der Sommen, F. Boers, T. van Hillegersberg, R. Van Eijnatten, M. A. J. M. Ruurda, J. P. |
author_sort | den Boer, R. B. |
collection | PubMed |
description | OBJECTIVE: To develop a deep learning algorithm for anatomy recognition in thoracoscopic video frames from robot-assisted minimally invasive esophagectomy (RAMIE) procedures using deep learning. BACKGROUND: RAMIE is a complex operation with substantial perioperative morbidity and a considerable learning curve. Automatic anatomy recognition may improve surgical orientation and recognition of anatomical structures and might contribute to reducing morbidity or learning curves. Studies regarding anatomy recognition in complex surgical procedures are currently lacking. METHODS: Eighty-three videos of consecutive RAMIE procedures between 2018 and 2022 were retrospectively collected at University Medical Center Utrecht. A surgical PhD candidate and an expert surgeon annotated the azygos vein and vena cava, aorta, and right lung on 1050 thoracoscopic frames. 850 frames were used for training of a convolutional neural network (CNN) to segment the anatomical structures. The remaining 200 frames of the dataset were used for testing the CNN. The Dice and 95% Hausdorff distance (95HD) were calculated to assess algorithm accuracy. RESULTS: The median Dice of the algorithm was 0.79 (IQR = 0.20) for segmentation of the azygos vein and/or vena cava. A median Dice coefficient of 0.74 (IQR = 0.86) and 0.89 (IQR = 0.30) were obtained for segmentation of the aorta and lung, respectively. Inference time was 0.026 s (39 Hz). The prediction of the deep learning algorithm was compared with the expert surgeon annotations, showing an accuracy measured in median Dice of 0.70 (IQR = 0.19), 0.88 (IQR = 0.07), and 0.90 (0.10) for the vena cava and/or azygos vein, aorta, and lung, respectively. CONCLUSION: This study shows that deep learning-based semantic segmentation has potential for anatomy recognition in RAMIE video frames. The inference time of the algorithm facilitated real-time anatomy recognition. Clinical applicability should be assessed in prospective clinical studies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00464-023-09990-z. |
format | Online Article Text |
id | pubmed-10322962 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-103229622023-07-07 Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy den Boer, R. B. Jaspers, T. J. M. de Jongh, C. Pluim, J. P. W. van der Sommen, F. Boers, T. van Hillegersberg, R. Van Eijnatten, M. A. J. M. Ruurda, J. P. Surg Endosc Article OBJECTIVE: To develop a deep learning algorithm for anatomy recognition in thoracoscopic video frames from robot-assisted minimally invasive esophagectomy (RAMIE) procedures using deep learning. BACKGROUND: RAMIE is a complex operation with substantial perioperative morbidity and a considerable learning curve. Automatic anatomy recognition may improve surgical orientation and recognition of anatomical structures and might contribute to reducing morbidity or learning curves. Studies regarding anatomy recognition in complex surgical procedures are currently lacking. METHODS: Eighty-three videos of consecutive RAMIE procedures between 2018 and 2022 were retrospectively collected at University Medical Center Utrecht. A surgical PhD candidate and an expert surgeon annotated the azygos vein and vena cava, aorta, and right lung on 1050 thoracoscopic frames. 850 frames were used for training of a convolutional neural network (CNN) to segment the anatomical structures. The remaining 200 frames of the dataset were used for testing the CNN. The Dice and 95% Hausdorff distance (95HD) were calculated to assess algorithm accuracy. RESULTS: The median Dice of the algorithm was 0.79 (IQR = 0.20) for segmentation of the azygos vein and/or vena cava. A median Dice coefficient of 0.74 (IQR = 0.86) and 0.89 (IQR = 0.30) were obtained for segmentation of the aorta and lung, respectively. Inference time was 0.026 s (39 Hz). The prediction of the deep learning algorithm was compared with the expert surgeon annotations, showing an accuracy measured in median Dice of 0.70 (IQR = 0.19), 0.88 (IQR = 0.07), and 0.90 (0.10) for the vena cava and/or azygos vein, aorta, and lung, respectively. CONCLUSION: This study shows that deep learning-based semantic segmentation has potential for anatomy recognition in RAMIE video frames. The inference time of the algorithm facilitated real-time anatomy recognition. Clinical applicability should be assessed in prospective clinical studies. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00464-023-09990-z. Springer US 2023-03-22 2023 /pmc/articles/PMC10322962/ /pubmed/36947221 http://dx.doi.org/10.1007/s00464-023-09990-z Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article den Boer, R. B. Jaspers, T. J. M. de Jongh, C. Pluim, J. P. W. van der Sommen, F. Boers, T. van Hillegersberg, R. Van Eijnatten, M. A. J. M. Ruurda, J. P. Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy |
title | Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy |
title_full | Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy |
title_fullStr | Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy |
title_full_unstemmed | Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy |
title_short | Deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy |
title_sort | deep learning-based recognition of key anatomical structures during robot-assisted minimally invasive esophagectomy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10322962/ https://www.ncbi.nlm.nih.gov/pubmed/36947221 http://dx.doi.org/10.1007/s00464-023-09990-z |
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