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Forecasting virus outbreaks with social media data via neural ordinary differential equations

During the Covid-19 pandemic, real-time social media data could in principle be used as an early predictor of a new epidemic wave. This possibility is examined here by employing a neural ordinary differential equation (neural ODE) trained to forecast viral outbreaks in a specific geographic region....

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Autores principales: Núñez, Matías, Barreiro, Nadia L., Barrio, Rafael A., Rackauckas, Christopher
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10322995/
https://www.ncbi.nlm.nih.gov/pubmed/37407583
http://dx.doi.org/10.1038/s41598-023-37118-9
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author Núñez, Matías
Barreiro, Nadia L.
Barrio, Rafael A.
Rackauckas, Christopher
author_facet Núñez, Matías
Barreiro, Nadia L.
Barrio, Rafael A.
Rackauckas, Christopher
author_sort Núñez, Matías
collection PubMed
description During the Covid-19 pandemic, real-time social media data could in principle be used as an early predictor of a new epidemic wave. This possibility is examined here by employing a neural ordinary differential equation (neural ODE) trained to forecast viral outbreaks in a specific geographic region. It learns from multivariate time series of signals derived from a novel set of large online polls regarding COVID-19 symptoms. Once trained, the neural ODE can capture the dynamics of interconnected local signals and effectively estimate the number of new infections up to two months in advance. In addition, it may predict the future consequences of changes in the number of infected at a certain period, which might be related with the flow of individuals entering or exiting a region. This study provides persuasive evidence for the predictive ability of widely disseminated social media surveys for public health applications.
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spelling pubmed-103229952023-07-07 Forecasting virus outbreaks with social media data via neural ordinary differential equations Núñez, Matías Barreiro, Nadia L. Barrio, Rafael A. Rackauckas, Christopher Sci Rep Article During the Covid-19 pandemic, real-time social media data could in principle be used as an early predictor of a new epidemic wave. This possibility is examined here by employing a neural ordinary differential equation (neural ODE) trained to forecast viral outbreaks in a specific geographic region. It learns from multivariate time series of signals derived from a novel set of large online polls regarding COVID-19 symptoms. Once trained, the neural ODE can capture the dynamics of interconnected local signals and effectively estimate the number of new infections up to two months in advance. In addition, it may predict the future consequences of changes in the number of infected at a certain period, which might be related with the flow of individuals entering or exiting a region. This study provides persuasive evidence for the predictive ability of widely disseminated social media surveys for public health applications. Nature Publishing Group UK 2023-07-05 /pmc/articles/PMC10322995/ /pubmed/37407583 http://dx.doi.org/10.1038/s41598-023-37118-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Núñez, Matías
Barreiro, Nadia L.
Barrio, Rafael A.
Rackauckas, Christopher
Forecasting virus outbreaks with social media data via neural ordinary differential equations
title Forecasting virus outbreaks with social media data via neural ordinary differential equations
title_full Forecasting virus outbreaks with social media data via neural ordinary differential equations
title_fullStr Forecasting virus outbreaks with social media data via neural ordinary differential equations
title_full_unstemmed Forecasting virus outbreaks with social media data via neural ordinary differential equations
title_short Forecasting virus outbreaks with social media data via neural ordinary differential equations
title_sort forecasting virus outbreaks with social media data via neural ordinary differential equations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10322995/
https://www.ncbi.nlm.nih.gov/pubmed/37407583
http://dx.doi.org/10.1038/s41598-023-37118-9
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