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Liquid NanoBiosensors Enable One‐Pot Electrochemical Detection of Bacteria in Complex Matrices

There is a need for point‐of‐care bacterial sensing and identification technologies that are rapid and simple to operate. Technologies that do not rely on growth cultures, nucleic acid amplification, step‐wise reagent addition, and complex sample processing are the key for meeting this need. Herein,...

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Autores principales: Imani, Sara M., Osman, Enas, Bakhshandeh, Fatemeh, Qian, Shuwen, Sakib, Sadman, MacDonald, Michael, Gaskin, Mark, Zhitomirsky, Igor, Yamamura, Deborah, Li, Yingfu, Didar, Tohid F., Soleymani, Leyla
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10323635/
https://www.ncbi.nlm.nih.gov/pubmed/37088731
http://dx.doi.org/10.1002/advs.202207223
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author Imani, Sara M.
Osman, Enas
Bakhshandeh, Fatemeh
Qian, Shuwen
Sakib, Sadman
MacDonald, Michael
Gaskin, Mark
Zhitomirsky, Igor
Yamamura, Deborah
Li, Yingfu
Didar, Tohid F.
Soleymani, Leyla
author_facet Imani, Sara M.
Osman, Enas
Bakhshandeh, Fatemeh
Qian, Shuwen
Sakib, Sadman
MacDonald, Michael
Gaskin, Mark
Zhitomirsky, Igor
Yamamura, Deborah
Li, Yingfu
Didar, Tohid F.
Soleymani, Leyla
author_sort Imani, Sara M.
collection PubMed
description There is a need for point‐of‐care bacterial sensing and identification technologies that are rapid and simple to operate. Technologies that do not rely on growth cultures, nucleic acid amplification, step‐wise reagent addition, and complex sample processing are the key for meeting this need. Herein, multiple materials technologies are integrated for overcoming the obstacles in creating rapid and one‐pot bacterial sensing platforms. Liquid‐infused nanoelectrodes are developed for reducing nonspecific binding on the transducer surface; bacterium‐specific RNA‐cleaving DNAzymes are used for bacterial identification; and redox DNA barcodes embedded into DNAzymes are used for binding‐induced electrochemical signal transduction. The resultant single‐step and one‐pot assay demonstrates a limit‐of‐detection of 10(2) CFU mL(−1), with high specificity in identifying Escherichia coli amongst other Gram positive and negative bacteria including Klebsiella pneumoniae, Staphylococcus aureus, and Bacillus subtilis. Additionally, this assay is evaluated for analyzing 31 clinically obtained urine samples, demonstrating a clinical sensitivity of 100% and specify of 100%. When challenging this assay with nine clinical blood cultures, E. coli‐positive and E. coli‐negative samples can be distinguished with a probability of p < 0.001.
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spelling pubmed-103236352023-07-07 Liquid NanoBiosensors Enable One‐Pot Electrochemical Detection of Bacteria in Complex Matrices Imani, Sara M. Osman, Enas Bakhshandeh, Fatemeh Qian, Shuwen Sakib, Sadman MacDonald, Michael Gaskin, Mark Zhitomirsky, Igor Yamamura, Deborah Li, Yingfu Didar, Tohid F. Soleymani, Leyla Adv Sci (Weinh) Research Articles There is a need for point‐of‐care bacterial sensing and identification technologies that are rapid and simple to operate. Technologies that do not rely on growth cultures, nucleic acid amplification, step‐wise reagent addition, and complex sample processing are the key for meeting this need. Herein, multiple materials technologies are integrated for overcoming the obstacles in creating rapid and one‐pot bacterial sensing platforms. Liquid‐infused nanoelectrodes are developed for reducing nonspecific binding on the transducer surface; bacterium‐specific RNA‐cleaving DNAzymes are used for bacterial identification; and redox DNA barcodes embedded into DNAzymes are used for binding‐induced electrochemical signal transduction. The resultant single‐step and one‐pot assay demonstrates a limit‐of‐detection of 10(2) CFU mL(−1), with high specificity in identifying Escherichia coli amongst other Gram positive and negative bacteria including Klebsiella pneumoniae, Staphylococcus aureus, and Bacillus subtilis. Additionally, this assay is evaluated for analyzing 31 clinically obtained urine samples, demonstrating a clinical sensitivity of 100% and specify of 100%. When challenging this assay with nine clinical blood cultures, E. coli‐positive and E. coli‐negative samples can be distinguished with a probability of p < 0.001. John Wiley and Sons Inc. 2023-04-23 /pmc/articles/PMC10323635/ /pubmed/37088731 http://dx.doi.org/10.1002/advs.202207223 Text en © 2023 The Authors. Advanced Science published by Wiley‐VCH GmbH https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Imani, Sara M.
Osman, Enas
Bakhshandeh, Fatemeh
Qian, Shuwen
Sakib, Sadman
MacDonald, Michael
Gaskin, Mark
Zhitomirsky, Igor
Yamamura, Deborah
Li, Yingfu
Didar, Tohid F.
Soleymani, Leyla
Liquid NanoBiosensors Enable One‐Pot Electrochemical Detection of Bacteria in Complex Matrices
title Liquid NanoBiosensors Enable One‐Pot Electrochemical Detection of Bacteria in Complex Matrices
title_full Liquid NanoBiosensors Enable One‐Pot Electrochemical Detection of Bacteria in Complex Matrices
title_fullStr Liquid NanoBiosensors Enable One‐Pot Electrochemical Detection of Bacteria in Complex Matrices
title_full_unstemmed Liquid NanoBiosensors Enable One‐Pot Electrochemical Detection of Bacteria in Complex Matrices
title_short Liquid NanoBiosensors Enable One‐Pot Electrochemical Detection of Bacteria in Complex Matrices
title_sort liquid nanobiosensors enable one‐pot electrochemical detection of bacteria in complex matrices
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10323635/
https://www.ncbi.nlm.nih.gov/pubmed/37088731
http://dx.doi.org/10.1002/advs.202207223
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