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De novo genome assembly of Akanthomyces muscarius, a biocontrol agent of insect agricultural pests

The entomopathogenic fungus Akanthomyces muscarius is commonly used in agriculture to manage insect pests. Besides its use as a commercially important biological control agent, it also presents a potential model for studying host–pathogen interactions and the evolution of virulence in a laboratory s...

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Detalles Bibliográficos
Autores principales: Erdos, Zoltan, Studholme, David John, Raymond, Ben, Sharma, Manmohan D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10323777/
https://www.ncbi.nlm.nih.gov/pubmed/37424543
http://dx.doi.org/10.1099/acmi.0.000568.v3
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author Erdos, Zoltan
Studholme, David John
Raymond, Ben
Sharma, Manmohan D.
author_facet Erdos, Zoltan
Studholme, David John
Raymond, Ben
Sharma, Manmohan D.
author_sort Erdos, Zoltan
collection PubMed
description The entomopathogenic fungus Akanthomyces muscarius is commonly used in agriculture to manage insect pests. Besides its use as a commercially important biological control agent, it also presents a potential model for studying host–pathogen interactions and the evolution of virulence in a laboratory setting. Here, we describe the first high-quality genome sequence for A. muscarius. We used long- and short-read sequencing to assemble a sequence of 36.1 Mb with an N(50) of 4.9 Mb. Genome annotation predicted 12347 genes, with 96.6 % completeness based on the core Hypocrealen gene set. The high-quality assembly and annotation of A. muscarius presented in this study provides an essential tool for future research on this commercially important species.
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spelling pubmed-103237772023-07-07 De novo genome assembly of Akanthomyces muscarius, a biocontrol agent of insect agricultural pests Erdos, Zoltan Studholme, David John Raymond, Ben Sharma, Manmohan D. Access Microbiol Short Communications The entomopathogenic fungus Akanthomyces muscarius is commonly used in agriculture to manage insect pests. Besides its use as a commercially important biological control agent, it also presents a potential model for studying host–pathogen interactions and the evolution of virulence in a laboratory setting. Here, we describe the first high-quality genome sequence for A. muscarius. We used long- and short-read sequencing to assemble a sequence of 36.1 Mb with an N(50) of 4.9 Mb. Genome annotation predicted 12347 genes, with 96.6 % completeness based on the core Hypocrealen gene set. The high-quality assembly and annotation of A. muscarius presented in this study provides an essential tool for future research on this commercially important species. Microbiology Society 2023-06-12 /pmc/articles/PMC10323777/ /pubmed/37424543 http://dx.doi.org/10.1099/acmi.0.000568.v3 Text en © 2023 The Authors https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License.
spellingShingle Short Communications
Erdos, Zoltan
Studholme, David John
Raymond, Ben
Sharma, Manmohan D.
De novo genome assembly of Akanthomyces muscarius, a biocontrol agent of insect agricultural pests
title De novo genome assembly of Akanthomyces muscarius, a biocontrol agent of insect agricultural pests
title_full De novo genome assembly of Akanthomyces muscarius, a biocontrol agent of insect agricultural pests
title_fullStr De novo genome assembly of Akanthomyces muscarius, a biocontrol agent of insect agricultural pests
title_full_unstemmed De novo genome assembly of Akanthomyces muscarius, a biocontrol agent of insect agricultural pests
title_short De novo genome assembly of Akanthomyces muscarius, a biocontrol agent of insect agricultural pests
title_sort de novo genome assembly of akanthomyces muscarius, a biocontrol agent of insect agricultural pests
topic Short Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10323777/
https://www.ncbi.nlm.nih.gov/pubmed/37424543
http://dx.doi.org/10.1099/acmi.0.000568.v3
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