Cargando…

Redefining normal breast cell populations using long noncoding RNAs

Single-cell RNAseq has allowed unprecedented insight into gene expression across different cell populations in normal tissue and disease states. However, almost all studies rely on annotated gene sets to capture gene expression levels and sequencing reads that do not align to known genes are discard...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bitar, Mainá, Rivera, Isela Sarahi, Almeida, Isabela, Shi, Wei, Ferguson, Kaltin, Beesley, Jonathan, Lakhani, Sunil R, Edwards, Stacey L, French, Juliet D
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2023
Materias:	RNA and RNA-protein complexes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10325898/ https://www.ncbi.nlm.nih.gov/pubmed/37144467 http://dx.doi.org/10.1093/nar/gkad339

Ejemplares similares

Allosteric regulation of noncoding RNA function by microRNAs
por: Gorbea, Carlos, et al.
Publicado: (2022)

Long noncoding RNA OCC-1 suppresses cell growth through destabilizing HuR protein in colorectal cancer
por: Lan, Yang, et al.
Publicado: (2018)

Long noncoding RNA lncMREF promotes myogenic differentiation and muscle regeneration by interacting with the Smarca5/p300 complex
por: Lv, Wei, et al.
Publicado: (2022)

Long noncoding RNA HCP5 participates in premature ovarian insufficiency by transcriptionally regulating MSH5 and DNA damage repair via YB1
por: Wang, Xiaoyan, et al.
Publicado: (2020)

Anatomy of noncovalent interactions between the nucleobases or ribose and π-containing amino acids in RNA–protein complexes
por: Wilson, Katie A, et al.
Publicado: (2021)

TNRC6 proteins modulate hepatitis C virus replication by spatially regulating the binding of miR-122/Ago2 complexes to viral RNA
por: Li, You, et al.
Publicado: (2019)

On the rules of engagement for microRNAs targeting protein coding regions
por: Sapkota, Sunil, et al.
Publicado: (2023)

RBFOX2 is required for establishing RNA regulatory networks essential for heart development
por: Verma, Sunil K, et al.
Publicado: (2022)

A mechanism underlying position-specific regulation of alternative splicing
por: Hamid, Fursham M., et al.
Publicado: (2017)

A cautionary tale of sense-antisense gene pairs: independent regulation despite inverse correlation of expression
por: Goyal, Ashish, et al.
Publicado: (2017)

Nol12 is a multifunctional RNA binding protein at the nexus of RNA and DNA metabolism
por: Scott, Daniel D., et al.
Publicado: (2017)

The RNA binding protein EWS is broadly involved in the regulation of pri-miRNA processing in mammalian cells
por: Ouyang, Huiwu, et al.
Publicado: (2017)

The MRPP1/MRPP2 complex is a tRNA-maturation platform in human mitochondria
por: Reinhard, Linda, et al.
Publicado: (2017)

Novel mechanisms of eIF2B action and regulation by eIF2α phosphorylation
por: Bogorad, Andrew M., et al.
Publicado: (2017)

Competition between translation initiation factor eIF5 and its mimic protein 5MP determines non-AUG initiation rate genome-wide
por: Tang, Leiming, et al.
Publicado: (2017)

Cdk5rap1-mediated 2-methylthio-N(6)-isopentenyladenosine modification is absent from nuclear-derived RNA species
por: Fakruddin, Md., et al.
Publicado: (2017)

The SMAD3 transcription factor binds complex RNA structures with high affinity
por: Dickey, Thayne H., et al.
Publicado: (2017)

An engineered RNA binding protein with improved splicing regulation
por: Hale, Melissa A, et al.
Publicado: (2018)

Cold-inducible RNA-binding protein (CIRP) induces translation of the cell-cycle inhibitor p27(Kip1)
por: Roilo, Martina, et al.
Publicado: (2018)

Viewing pre-60S maturation at a minute’s timescale
por: Zisser, Gertrude, et al.
Publicado: (2018)

Combined roles of ATP and small hairpin RNA in the activation of RIG-I revealed by solution-based analysis
por: Shah, Neelam, et al.
Publicado: (2018)

Viral suppressors of RNAi employ a rapid screening mode to discriminate viral RNA from cellular small RNA
por: Fareh, Mohamed, et al.
Publicado: (2018)

Translational regulation by bacterial small RNAs via an unusual Hfq-dependent mechanism
por: Azam, Muhammad S, et al.
Publicado: (2018)

Contrasting silencing mechanisms of the same target mRNA by two regulatory RNAs in Escherichia coli
por: Lalaouna, David, et al.
Publicado: (2018)

Probing of RNA structures in a positive sense RNA virus reveals selection pressures for structural elements
por: Watters, Kyle E, et al.
Publicado: (2018)

RNA-binding specificity landscapes of designer pentatricopeptide repeat proteins elucidate principles of PPR–RNA interactions
por: Miranda, Rafael G, et al.
Publicado: (2018)

Multiple RNA structures affect translation initiation and UGA redefinition efficiency during synthesis of selenoprotein P
por: Mariotti, Marco, et al.
Publicado: (2017)

Polycytidylation of mitochondrial mRNAs in Chlamydomonas reinhardtii
por: Salinas-Giegé, Thalia, et al.
Publicado: (2017)

Biogenesis and iron-dependency of ribosomal RNA hydroxylation
por: Kimura, Satoshi, et al.
Publicado: (2017)

Conserved structures formed by heterogeneous RNA sequences drive silencing of an inflammation responsive post-transcriptional operon
por: Basu, Abhijit, et al.
Publicado: (2017)

Distinct roles for the IIId2 sub-domain in pestivirus and picornavirus internal ribosome entry sites
por: Willcocks, Margaret M., et al.
Publicado: (2017)

Tuning RNA folding and function through rational design of junction topology
por: Daher, May, et al.
Publicado: (2017)

A structural map of oncomiR-1 at single-nucleotide resolution
por: Chakraborty, Saikat, et al.
Publicado: (2017)

ALYREF mainly binds to the 5′ and the 3′ regions of the mRNA in vivo
por: Shi, Min, et al.
Publicado: (2017)

The conserved AU dinucleotide at the 5′ end of nascent U1 snRNA is optimized for the interaction with nuclear cap-binding-complex
por: Yeh, Chung-Shu, et al.
Publicado: (2017)

In vivo probing of nascent RNA structures reveals principles of cotranscriptional folding
por: Incarnato, Danny, et al.
Publicado: (2017)

hnRNP L controls HPV16 RNA polyadenylation and splicing in an Akt kinase-dependent manner
por: Kajitani, Naoko, et al.
Publicado: (2017)

The important conformational plasticity of DsrA sRNA for adapting multiple target regulation
por: Wu, Pengzhi, et al.
Publicado: (2017)

Naturally existing isoforms of miR-222 have distinct functions
por: Yu, Feng, et al.
Publicado: (2017)

Initiating ribosomes and a 5′/3′-UTR interaction control ribonuclease action to tightly couple B. subtilis hbs mRNA stability with translation
por: Braun, Frédérique, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_lrb0u3lfe596jjnv16r0cs4d5p