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A two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts
INTRODUCTION: Automatic sleep staging is a classification process with severe class imbalance and suffers from instability of scoring stage N1. Decreased accuracy in classifying stage N1 significantly impacts the staging of individuals with sleep disorders. We aim to achieve automatic sleep staging...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10326279/ https://www.ncbi.nlm.nih.gov/pubmed/37424992 http://dx.doi.org/10.3389/fnins.2023.1176551 |
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author | Zhang, Di Sun, Jinbo She, Yichong Cui, Yapeng Zeng, Xiao Lu, Liming Tang, Chunzhi Xu, Nenggui Chen, Badong Qin, Wei |
author_facet | Zhang, Di Sun, Jinbo She, Yichong Cui, Yapeng Zeng, Xiao Lu, Liming Tang, Chunzhi Xu, Nenggui Chen, Badong Qin, Wei |
author_sort | Zhang, Di |
collection | PubMed |
description | INTRODUCTION: Automatic sleep staging is a classification process with severe class imbalance and suffers from instability of scoring stage N1. Decreased accuracy in classifying stage N1 significantly impacts the staging of individuals with sleep disorders. We aim to achieve automatic sleep staging with expert-level performance in both N1 stage and overall scoring. METHODS: A neural network model combines an attention-based convolutional neural network and a classifier with two branches is developed. A transitive training strategy is employed to balance universal feature learning and contextual referencing. Parameter optimization and benchmark comparisons are conducted using a large-scale dataset, followed by evaluation on seven datasets in five cohorts. RESULTS: The proposed model achieves an accuracy of 88.16%, Cohen’s kappa of 0.836, and MF1 score of 0.818 on the SHHS1 test set, also with comparable performance to human scorers in scoring stage N1. Incorporating multiple cohort data improves its performance. Notably, the model maintains high performance when applied to unseen datasets and patients with neurological or psychiatric disorders. DISCUSSION: The proposed algorithm demonstrates strong performance and generalizablility, and its direct transferability is noteworthy among similar studies on automated sleep staging. It is publicly available, which is conducive to expanding access to sleep-related analysis, especially those associated with neurological or psychiatric disorders. |
format | Online Article Text |
id | pubmed-10326279 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103262792023-07-08 A two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts Zhang, Di Sun, Jinbo She, Yichong Cui, Yapeng Zeng, Xiao Lu, Liming Tang, Chunzhi Xu, Nenggui Chen, Badong Qin, Wei Front Neurosci Neuroscience INTRODUCTION: Automatic sleep staging is a classification process with severe class imbalance and suffers from instability of scoring stage N1. Decreased accuracy in classifying stage N1 significantly impacts the staging of individuals with sleep disorders. We aim to achieve automatic sleep staging with expert-level performance in both N1 stage and overall scoring. METHODS: A neural network model combines an attention-based convolutional neural network and a classifier with two branches is developed. A transitive training strategy is employed to balance universal feature learning and contextual referencing. Parameter optimization and benchmark comparisons are conducted using a large-scale dataset, followed by evaluation on seven datasets in five cohorts. RESULTS: The proposed model achieves an accuracy of 88.16%, Cohen’s kappa of 0.836, and MF1 score of 0.818 on the SHHS1 test set, also with comparable performance to human scorers in scoring stage N1. Incorporating multiple cohort data improves its performance. Notably, the model maintains high performance when applied to unseen datasets and patients with neurological or psychiatric disorders. DISCUSSION: The proposed algorithm demonstrates strong performance and generalizablility, and its direct transferability is noteworthy among similar studies on automated sleep staging. It is publicly available, which is conducive to expanding access to sleep-related analysis, especially those associated with neurological or psychiatric disorders. Frontiers Media S.A. 2023-06-23 /pmc/articles/PMC10326279/ /pubmed/37424992 http://dx.doi.org/10.3389/fnins.2023.1176551 Text en Copyright © 2023 Zhang, Sun, She, Cui, Zeng, Lu, Tang, Xu, Chen and Qin. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Zhang, Di Sun, Jinbo She, Yichong Cui, Yapeng Zeng, Xiao Lu, Liming Tang, Chunzhi Xu, Nenggui Chen, Badong Qin, Wei A two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts |
title | A two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts |
title_full | A two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts |
title_fullStr | A two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts |
title_full_unstemmed | A two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts |
title_short | A two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts |
title_sort | two-branch trade-off neural network for balanced scoring sleep stages on multiple cohorts |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10326279/ https://www.ncbi.nlm.nih.gov/pubmed/37424992 http://dx.doi.org/10.3389/fnins.2023.1176551 |
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