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UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood

[Image: see text] Integrating nucleic acid extraction in amplification-based point-of-care diagnostics will be a significant feature for next-generation point-of-care virus detection devices. However, extracting DNA efficiently on a microfluidic chip poses many technological and commercialization ch...

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Autores principales: Jagannath, Akshaya, Li, Yinghao, Cong, Hengji, Hassan, Jaythoon, Gonzalez, Gabriel, Wang, Wenxin, Zhang, Nan, Gilchrist, Michael D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10326802/
https://www.ncbi.nlm.nih.gov/pubmed/37319124
http://dx.doi.org/10.1021/acsami.3c03523
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author Jagannath, Akshaya
Li, Yinghao
Cong, Hengji
Hassan, Jaythoon
Gonzalez, Gabriel
Wang, Wenxin
Zhang, Nan
Gilchrist, Michael D.
author_facet Jagannath, Akshaya
Li, Yinghao
Cong, Hengji
Hassan, Jaythoon
Gonzalez, Gabriel
Wang, Wenxin
Zhang, Nan
Gilchrist, Michael D.
author_sort Jagannath, Akshaya
collection PubMed
description [Image: see text] Integrating nucleic acid extraction in amplification-based point-of-care diagnostics will be a significant feature for next-generation point-of-care virus detection devices. However, extracting DNA efficiently on a microfluidic chip poses many technological and commercialization challenges, including manual steps, multiple instruments, pretreatment processes, and the use of organic solvents (ethanol, IPA) that inhibit detection, which is not viable with routine testing such as viral load monitoring of transplant patients for post-operative care. This paper presents a microfluidic system capable of two-step DNA extraction from blood using a UV-assisted hyperbranched poly(β-amino ester) (HPAE)-modified silica membrane for cytomegalovirus (CMV) detection in a rapid and instrument-free manner without the presence of amplification inhibitors. HPAEs of varying branch ratios were synthesized, screened, and coated on a silica membrane and bonded between two layers of poly(methyl methacrylate) (PMMA) substrates. Our system could selectively extract DNA from blood with an efficiency of 94% and a lower limit viral load of 300 IU/mL in 20 min. The extracted DNA was used as the template for real-time loop-mediated isothermal amplification (LAMP)-based detection of CMV and was found to produce a fluorescent signal intensity that was comparable with commercially extracted templates. This system can be integrated easily with a nucleic acid amplification system and used for routine rapid testing of viral load in patient blood samples.
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spelling pubmed-103268022023-07-08 UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood Jagannath, Akshaya Li, Yinghao Cong, Hengji Hassan, Jaythoon Gonzalez, Gabriel Wang, Wenxin Zhang, Nan Gilchrist, Michael D. ACS Appl Mater Interfaces [Image: see text] Integrating nucleic acid extraction in amplification-based point-of-care diagnostics will be a significant feature for next-generation point-of-care virus detection devices. However, extracting DNA efficiently on a microfluidic chip poses many technological and commercialization challenges, including manual steps, multiple instruments, pretreatment processes, and the use of organic solvents (ethanol, IPA) that inhibit detection, which is not viable with routine testing such as viral load monitoring of transplant patients for post-operative care. This paper presents a microfluidic system capable of two-step DNA extraction from blood using a UV-assisted hyperbranched poly(β-amino ester) (HPAE)-modified silica membrane for cytomegalovirus (CMV) detection in a rapid and instrument-free manner without the presence of amplification inhibitors. HPAEs of varying branch ratios were synthesized, screened, and coated on a silica membrane and bonded between two layers of poly(methyl methacrylate) (PMMA) substrates. Our system could selectively extract DNA from blood with an efficiency of 94% and a lower limit viral load of 300 IU/mL in 20 min. The extracted DNA was used as the template for real-time loop-mediated isothermal amplification (LAMP)-based detection of CMV and was found to produce a fluorescent signal intensity that was comparable with commercially extracted templates. This system can be integrated easily with a nucleic acid amplification system and used for routine rapid testing of viral load in patient blood samples. American Chemical Society 2023-06-15 /pmc/articles/PMC10326802/ /pubmed/37319124 http://dx.doi.org/10.1021/acsami.3c03523 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Jagannath, Akshaya
Li, Yinghao
Cong, Hengji
Hassan, Jaythoon
Gonzalez, Gabriel
Wang, Wenxin
Zhang, Nan
Gilchrist, Michael D.
UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood
title UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood
title_full UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood
title_fullStr UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood
title_full_unstemmed UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood
title_short UV-Assisted Hyperbranched Poly(β-amino ester) Modification of a Silica Membrane for Two-Step Microfluidic DNA Extraction from Blood
title_sort uv-assisted hyperbranched poly(β-amino ester) modification of a silica membrane for two-step microfluidic dna extraction from blood
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10326802/
https://www.ncbi.nlm.nih.gov/pubmed/37319124
http://dx.doi.org/10.1021/acsami.3c03523
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