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author Dorkenwald, Sven
Matsliah, Arie
Sterling, Amy R
Schlegel, Philipp
Yu, Szi-chieh
McKellar, Claire E.
Lin, Albert
Costa, Marta
Eichler, Katharina
Yin, Yijie
Silversmith, Will
Schneider-Mizell, Casey
Jordan, Chris S.
Brittain, Derrick
Halageri, Akhilesh
Kuehner, Kai
Ogedengbe, Oluwaseun
Morey, Ryan
Gager, Jay
Kruk, Krzysztof
Perlman, Eric
Yang, Runzhe
Deutsch, David
Bland, Doug
Sorek, Marissa
Lu, Ran
Macrina, Thomas
Lee, Kisuk
Bae, J. Alexander
Mu, Shang
Nehoran, Barak
Mitchell, Eric
Popovych, Sergiy
Wu, Jingpeng
Jia, Zhen
Castro, Manuel
Kemnitz, Nico
Ih, Dodam
Bates, Alexander Shakeel
Eckstein, Nils
Funke, Jan
Collman, Forrest
Bock, Davi D.
Jefferis, Gregory S.X.E
Seung, H. Sebastian
Murthy, Mala
author_facet Dorkenwald, Sven
Matsliah, Arie
Sterling, Amy R
Schlegel, Philipp
Yu, Szi-chieh
McKellar, Claire E.
Lin, Albert
Costa, Marta
Eichler, Katharina
Yin, Yijie
Silversmith, Will
Schneider-Mizell, Casey
Jordan, Chris S.
Brittain, Derrick
Halageri, Akhilesh
Kuehner, Kai
Ogedengbe, Oluwaseun
Morey, Ryan
Gager, Jay
Kruk, Krzysztof
Perlman, Eric
Yang, Runzhe
Deutsch, David
Bland, Doug
Sorek, Marissa
Lu, Ran
Macrina, Thomas
Lee, Kisuk
Bae, J. Alexander
Mu, Shang
Nehoran, Barak
Mitchell, Eric
Popovych, Sergiy
Wu, Jingpeng
Jia, Zhen
Castro, Manuel
Kemnitz, Nico
Ih, Dodam
Bates, Alexander Shakeel
Eckstein, Nils
Funke, Jan
Collman, Forrest
Bock, Davi D.
Jefferis, Gregory S.X.E
Seung, H. Sebastian
Murthy, Mala
author_sort Dorkenwald, Sven
collection PubMed
description Connections between neurons can be mapped by acquiring and analyzing electron microscopic (EM) brain images. In recent years, this approach has been applied to chunks of brains to reconstruct local connectivity maps that are highly informative, yet inadequate for understanding brain function more globally. Here, we present the first neuronal wiring diagram of a whole adult brain, containing 5×10(7) chemical synapses between ~130,000 neurons reconstructed from a female Drosophila melanogaster. The resource also incorporates annotations of cell classes and types, nerves, hemilineages, and predictions of neurotransmitter identities. Data products are available by download, programmatic access, and interactive browsing and made interoperable with other fly data resources. We show how to derive a projectome, a map of projections between regions, from the connectome. We demonstrate the tracing of synaptic pathways and the analysis of information flow from inputs (sensory and ascending neurons) to outputs (motor, endocrine, and descending neurons), across both hemispheres, and between the central brain and the optic lobes. Tracing from a subset of photoreceptors all the way to descending motor pathways illustrates how structure can uncover putative circuit mechanisms underlying sensorimotor behaviors. The technologies and open ecosystem of the FlyWire Consortium set the stage for future large-scale connectome projects in other species.
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spelling pubmed-103271132023-07-08 Neuronal wiring diagram of an adult brain Dorkenwald, Sven Matsliah, Arie Sterling, Amy R Schlegel, Philipp Yu, Szi-chieh McKellar, Claire E. Lin, Albert Costa, Marta Eichler, Katharina Yin, Yijie Silversmith, Will Schneider-Mizell, Casey Jordan, Chris S. Brittain, Derrick Halageri, Akhilesh Kuehner, Kai Ogedengbe, Oluwaseun Morey, Ryan Gager, Jay Kruk, Krzysztof Perlman, Eric Yang, Runzhe Deutsch, David Bland, Doug Sorek, Marissa Lu, Ran Macrina, Thomas Lee, Kisuk Bae, J. Alexander Mu, Shang Nehoran, Barak Mitchell, Eric Popovych, Sergiy Wu, Jingpeng Jia, Zhen Castro, Manuel Kemnitz, Nico Ih, Dodam Bates, Alexander Shakeel Eckstein, Nils Funke, Jan Collman, Forrest Bock, Davi D. Jefferis, Gregory S.X.E Seung, H. Sebastian Murthy, Mala bioRxiv Article Connections between neurons can be mapped by acquiring and analyzing electron microscopic (EM) brain images. In recent years, this approach has been applied to chunks of brains to reconstruct local connectivity maps that are highly informative, yet inadequate for understanding brain function more globally. Here, we present the first neuronal wiring diagram of a whole adult brain, containing 5×10(7) chemical synapses between ~130,000 neurons reconstructed from a female Drosophila melanogaster. The resource also incorporates annotations of cell classes and types, nerves, hemilineages, and predictions of neurotransmitter identities. Data products are available by download, programmatic access, and interactive browsing and made interoperable with other fly data resources. We show how to derive a projectome, a map of projections between regions, from the connectome. We demonstrate the tracing of synaptic pathways and the analysis of information flow from inputs (sensory and ascending neurons) to outputs (motor, endocrine, and descending neurons), across both hemispheres, and between the central brain and the optic lobes. Tracing from a subset of photoreceptors all the way to descending motor pathways illustrates how structure can uncover putative circuit mechanisms underlying sensorimotor behaviors. The technologies and open ecosystem of the FlyWire Consortium set the stage for future large-scale connectome projects in other species. Cold Spring Harbor Laboratory 2023-07-11 /pmc/articles/PMC10327113/ /pubmed/37425937 http://dx.doi.org/10.1101/2023.06.27.546656 Text en https://creativecommons.org/licenses/by-nd/4.0/This work is licensed under a Creative Commons Attribution-NoDerivatives 4.0 International License (https://creativecommons.org/licenses/by-nd/4.0/) , which allows reusers to copy and distribute the material in any medium or format in unadapted form only, and only so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Dorkenwald, Sven
Matsliah, Arie
Sterling, Amy R
Schlegel, Philipp
Yu, Szi-chieh
McKellar, Claire E.
Lin, Albert
Costa, Marta
Eichler, Katharina
Yin, Yijie
Silversmith, Will
Schneider-Mizell, Casey
Jordan, Chris S.
Brittain, Derrick
Halageri, Akhilesh
Kuehner, Kai
Ogedengbe, Oluwaseun
Morey, Ryan
Gager, Jay
Kruk, Krzysztof
Perlman, Eric
Yang, Runzhe
Deutsch, David
Bland, Doug
Sorek, Marissa
Lu, Ran
Macrina, Thomas
Lee, Kisuk
Bae, J. Alexander
Mu, Shang
Nehoran, Barak
Mitchell, Eric
Popovych, Sergiy
Wu, Jingpeng
Jia, Zhen
Castro, Manuel
Kemnitz, Nico
Ih, Dodam
Bates, Alexander Shakeel
Eckstein, Nils
Funke, Jan
Collman, Forrest
Bock, Davi D.
Jefferis, Gregory S.X.E
Seung, H. Sebastian
Murthy, Mala
Neuronal wiring diagram of an adult brain
title Neuronal wiring diagram of an adult brain
title_full Neuronal wiring diagram of an adult brain
title_fullStr Neuronal wiring diagram of an adult brain
title_full_unstemmed Neuronal wiring diagram of an adult brain
title_short Neuronal wiring diagram of an adult brain
title_sort neuronal wiring diagram of an adult brain
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10327113/
https://www.ncbi.nlm.nih.gov/pubmed/37425937
http://dx.doi.org/10.1101/2023.06.27.546656
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