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Application of next generation sequencing in cardiology: current and future precision medicine implications
Inherited cardiovascular diseases are highly heterogeneous conditions with multiple genetic loci involved. The application of advanced molecular tools, such as Next Generation Sequencing, has facilitated the genetic analysis of these disorders. Accurate analysis and variant identification are requir...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10327645/ https://www.ncbi.nlm.nih.gov/pubmed/37424920 http://dx.doi.org/10.3389/fcvm.2023.1202381 |
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author | Papadopoulou, Eirini Bouzarelou, Dimitra Tsaousis, George Papathanasiou, Athanasios Vogiatzi, Georgia Vlachopoulos, Charalambos Miliou, Antigoni Papachristou, Panagiota Prappa, Efstathia Servos, Georgios Ritsatos, Konstantinos Seretis, Aristeidis Frogoudaki, Alexandra Nasioulas, George |
author_facet | Papadopoulou, Eirini Bouzarelou, Dimitra Tsaousis, George Papathanasiou, Athanasios Vogiatzi, Georgia Vlachopoulos, Charalambos Miliou, Antigoni Papachristou, Panagiota Prappa, Efstathia Servos, Georgios Ritsatos, Konstantinos Seretis, Aristeidis Frogoudaki, Alexandra Nasioulas, George |
author_sort | Papadopoulou, Eirini |
collection | PubMed |
description | Inherited cardiovascular diseases are highly heterogeneous conditions with multiple genetic loci involved. The application of advanced molecular tools, such as Next Generation Sequencing, has facilitated the genetic analysis of these disorders. Accurate analysis and variant identification are required to maximize the quality of the sequencing data. Therefore, the application of NGS for clinical purposes should be limited to laboratories with a high level of technological expertise and resources. In addition, appropriate gene selection and variant interpretation can result in the highest possible diagnostic yield. Implementation of genetics in cardiology is imperative for the accurate diagnosis, prognosis and management of several inherited disorders and could eventually lead to the realization of precision medicine in this field. However, genetic testing should also be accompanied by an appropriate genetic counseling procedure that clarifies the significance of the genetic analysis results for the proband and his family. In this regard, a multidisciplinary collaboration among physicians, geneticists, and bioinformaticians is imperative. In the present review, we address the current state of knowledge regarding genetic analysis strategies employed in the field of cardiogenetics. Variant interpretation and reporting guidelines are explored. Additionally, gene selection procedures are accessed, with a particular emphasis on information concerning gene-disease associations collected from international alliances such as the Gene Curation Coalition (GenCC). In this context, a novel approach to gene categorization is proposed. Moreover, a sub-analysis is conducted on the 1,502,769 variation records with submitted interpretations in the Clinical Variation (ClinVar) database, focusing on cardiology-related genes. Finally, the most recent information on genetic analysis's clinical utility is reviewed. |
format | Online Article Text |
id | pubmed-10327645 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103276452023-07-08 Application of next generation sequencing in cardiology: current and future precision medicine implications Papadopoulou, Eirini Bouzarelou, Dimitra Tsaousis, George Papathanasiou, Athanasios Vogiatzi, Georgia Vlachopoulos, Charalambos Miliou, Antigoni Papachristou, Panagiota Prappa, Efstathia Servos, Georgios Ritsatos, Konstantinos Seretis, Aristeidis Frogoudaki, Alexandra Nasioulas, George Front Cardiovasc Med Cardiovascular Medicine Inherited cardiovascular diseases are highly heterogeneous conditions with multiple genetic loci involved. The application of advanced molecular tools, such as Next Generation Sequencing, has facilitated the genetic analysis of these disorders. Accurate analysis and variant identification are required to maximize the quality of the sequencing data. Therefore, the application of NGS for clinical purposes should be limited to laboratories with a high level of technological expertise and resources. In addition, appropriate gene selection and variant interpretation can result in the highest possible diagnostic yield. Implementation of genetics in cardiology is imperative for the accurate diagnosis, prognosis and management of several inherited disorders and could eventually lead to the realization of precision medicine in this field. However, genetic testing should also be accompanied by an appropriate genetic counseling procedure that clarifies the significance of the genetic analysis results for the proband and his family. In this regard, a multidisciplinary collaboration among physicians, geneticists, and bioinformaticians is imperative. In the present review, we address the current state of knowledge regarding genetic analysis strategies employed in the field of cardiogenetics. Variant interpretation and reporting guidelines are explored. Additionally, gene selection procedures are accessed, with a particular emphasis on information concerning gene-disease associations collected from international alliances such as the Gene Curation Coalition (GenCC). In this context, a novel approach to gene categorization is proposed. Moreover, a sub-analysis is conducted on the 1,502,769 variation records with submitted interpretations in the Clinical Variation (ClinVar) database, focusing on cardiology-related genes. Finally, the most recent information on genetic analysis's clinical utility is reviewed. Frontiers Media S.A. 2023-06-23 /pmc/articles/PMC10327645/ /pubmed/37424920 http://dx.doi.org/10.3389/fcvm.2023.1202381 Text en © 2023 Papadopoulou, Bouzarelou, Tsaousis, Papathanasiou, Vogiatzi, Vlachopoulos, Miliou, Papachristou, Prappa, Servos, Ritsatos, Seretis, Frogoudaki and Nasioulas. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) (https://creativecommons.org/licenses/by/4.0/) . The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cardiovascular Medicine Papadopoulou, Eirini Bouzarelou, Dimitra Tsaousis, George Papathanasiou, Athanasios Vogiatzi, Georgia Vlachopoulos, Charalambos Miliou, Antigoni Papachristou, Panagiota Prappa, Efstathia Servos, Georgios Ritsatos, Konstantinos Seretis, Aristeidis Frogoudaki, Alexandra Nasioulas, George Application of next generation sequencing in cardiology: current and future precision medicine implications |
title | Application of next generation sequencing in cardiology: current and future precision medicine implications |
title_full | Application of next generation sequencing in cardiology: current and future precision medicine implications |
title_fullStr | Application of next generation sequencing in cardiology: current and future precision medicine implications |
title_full_unstemmed | Application of next generation sequencing in cardiology: current and future precision medicine implications |
title_short | Application of next generation sequencing in cardiology: current and future precision medicine implications |
title_sort | application of next generation sequencing in cardiology: current and future precision medicine implications |
topic | Cardiovascular Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10327645/ https://www.ncbi.nlm.nih.gov/pubmed/37424920 http://dx.doi.org/10.3389/fcvm.2023.1202381 |
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