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Dicer structure and function: conserved and evolving features
RNase III Dicer produces small RNAs guiding sequence‐specific regulations, with important biological roles in eukaryotes. Major Dicer‐dependent mechanisms are RNA interference (RNAi) and microRNA (miRNA) pathways, which employ distinct types of small RNAs. Small interfering RNAs (siRNAs) for RNAi ar...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10328071/ https://www.ncbi.nlm.nih.gov/pubmed/37310138 http://dx.doi.org/10.15252/embr.202357215 |
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author | Zapletal, David Kubicek, Karel Svoboda, Petr Stefl, Richard |
author_facet | Zapletal, David Kubicek, Karel Svoboda, Petr Stefl, Richard |
author_sort | Zapletal, David |
collection | PubMed |
description | RNase III Dicer produces small RNAs guiding sequence‐specific regulations, with important biological roles in eukaryotes. Major Dicer‐dependent mechanisms are RNA interference (RNAi) and microRNA (miRNA) pathways, which employ distinct types of small RNAs. Small interfering RNAs (siRNAs) for RNAi are produced by Dicer from long double‐stranded RNA (dsRNA) as a pool of different small RNAs. In contrast, miRNAs have specific sequences because they are precisely cleaved out from small hairpin precursors. Some Dicer homologs efficiently generate both, siRNAs and miRNAs, while others are adapted for biogenesis of one small RNA type. Here, we review the wealth of recent structural analyses of animal and plant Dicers, which have revealed how different domains and their adaptations contribute to substrate recognition and cleavage in different organisms and pathways. These data imply that siRNA generation was Dicer's ancestral role and that miRNA biogenesis relies on derived features. While the key element of functional divergence is a RIG‐I‐like helicase domain, Dicer‐mediated small RNA biogenesis also documents the impressive functional versatility of the dsRNA‐binding domain. |
format | Online Article Text |
id | pubmed-10328071 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103280712023-07-08 Dicer structure and function: conserved and evolving features Zapletal, David Kubicek, Karel Svoboda, Petr Stefl, Richard EMBO Rep Review RNase III Dicer produces small RNAs guiding sequence‐specific regulations, with important biological roles in eukaryotes. Major Dicer‐dependent mechanisms are RNA interference (RNAi) and microRNA (miRNA) pathways, which employ distinct types of small RNAs. Small interfering RNAs (siRNAs) for RNAi are produced by Dicer from long double‐stranded RNA (dsRNA) as a pool of different small RNAs. In contrast, miRNAs have specific sequences because they are precisely cleaved out from small hairpin precursors. Some Dicer homologs efficiently generate both, siRNAs and miRNAs, while others are adapted for biogenesis of one small RNA type. Here, we review the wealth of recent structural analyses of animal and plant Dicers, which have revealed how different domains and their adaptations contribute to substrate recognition and cleavage in different organisms and pathways. These data imply that siRNA generation was Dicer's ancestral role and that miRNA biogenesis relies on derived features. While the key element of functional divergence is a RIG‐I‐like helicase domain, Dicer‐mediated small RNA biogenesis also documents the impressive functional versatility of the dsRNA‐binding domain. John Wiley and Sons Inc. 2023-06-13 /pmc/articles/PMC10328071/ /pubmed/37310138 http://dx.doi.org/10.15252/embr.202357215 Text en © 2023 The Authors. Published under the terms of the CC BY 4.0 license. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Review Zapletal, David Kubicek, Karel Svoboda, Petr Stefl, Richard Dicer structure and function: conserved and evolving features |
title | Dicer structure and function: conserved and evolving features |
title_full | Dicer structure and function: conserved and evolving features |
title_fullStr | Dicer structure and function: conserved and evolving features |
title_full_unstemmed | Dicer structure and function: conserved and evolving features |
title_short | Dicer structure and function: conserved and evolving features |
title_sort | dicer structure and function: conserved and evolving features |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10328071/ https://www.ncbi.nlm.nih.gov/pubmed/37310138 http://dx.doi.org/10.15252/embr.202357215 |
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