Cargando…

Elucidating dynamic cell lineages and gene networks in time-course single cell differentiation

Single cell RNA sequencing (scRNA-seq) technologies provide researchers with an unprecedented opportunity to exploit cell heterogeneity. For example, the sequenced cells belong to various cell lineages, which may have different cell fates in stem and progenitor cells. Those cells may differentiate i...

Descripción completa

Detalles Bibliográficos
Autores principales:	Zhang, Mengrui, Chen, Yongkai, Yu, Dingyi, Zhong, Wenxuan, Zhang, Jingyi, Ma, Ping
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10328540/ https://www.ncbi.nlm.nih.gov/pubmed/37426065 http://dx.doi.org/10.1016/j.ailsci.2023.100068

Ejemplares similares

Elucidating dynamic metabolic physiology through network integration of quantitative time-course metabolomics
por: Bordbar, Aarash, et al.
Publicado: (2017)

Dynamics of lineage commitment revealed by single-cell transcriptomics of differentiating embryonic stem cells
por: Semrau, Stefan, et al.
Publicado: (2017)

Single‐cell dynamics of chromatin activity during cell lineage differentiation in Caenorhabditis elegans embryos
por: Zhao, Zhiguang, et al.
Publicado: (2021)

Alignment of Cell Lineage Trees Elucidates Genetic Programs for the Development and Evolution of Cell Types
por: Yuan, Meng, et al.
Publicado: (2020)

Elucidating the cellular dynamics of the brain with single-cell RNA sequencing
por: Cardona-Alberich, Aida, et al.
Publicado: (2021)

A data-driven clustering method for time course gene expression data
por: Ma, Ping, et al.
Publicado: (2006)

Recording development with single cell dynamic lineage tracing
por: McKenna, Aaron, et al.
Publicado: (2019)

Ensemble machine learning approach for screening of coronary heart disease based on echocardiography and risk factors
por: Zhang, Jingyi, et al.
Publicado: (2021)

Elucidating population-wide mycobacterial replication dynamics at the single-cell level
por: Mouton, Jacoba M., et al.
Publicado: (2016)

SLICE: determining cell differentiation and lineage based on single cell entropy
por: Guo, Minzhe, et al.
Publicado: (2017)

Single Cell Transcriptomes, Lineage, and Differentiation of Functional Airway Microfold Cells
por: Surve, Manalee V., et al.
Publicado: (2023)

Lineage dynamics of murine pancreatic development at single-cell resolution
por: Byrnes, Lauren E., et al.
Publicado: (2018)

Single-cell analysis of progenitor cell dynamics and lineage specification in the human fetal kidney
por: Menon, Rajasree, et al.
Publicado: (2018)

Toward Elucidating Epigenetic and Metabolic Regulation of Stem Cell Lineage Plasticity in Skin Aging
por: Lyu, Ying, et al.
Publicado: (2022)

Statistical inference for time course RNA-Seq data using a negative binomial mixed-effect model
por: Sun, Xiaoxiao, et al.
Publicado: (2016)

Single-cell transcriptomes of peripheral blood cells indicate and elucidate severity of COVID-19
por: Xie, Xiaowei, et al.
Publicado: (2021)

Transcriptome and single-cell analysis reveal the contribution of immunosuppressive microenvironment for promoting glioblastoma progression
por: Ni, Lulu, et al.
Publicado: (2023)

Differential Protein Network Analysis of the Immune Cell Lineage
por: Clancy, Trevor, et al.
Publicado: (2014)

Drug screening with zebrafish visual behavior identifies carvedilol as a potential treatment for an autosomal dominant form of retinitis pigmentosa
por: Ganzen, Logan, et al.
Publicado: (2021)

Elucidating T Cell Activation-Dependent Mechanisms for Bifurcation of Regulatory and Effector T Cell Differentiation by Multidimensional and Single-Cell Analysis
por: Bradley, Alla, et al.
Publicado: (2018)

Single Cell Transcriptomics-Informed Induced Pluripotent Stem Cells Differentiation to Tenogenic Lineage
por: Papalamprou, Angela, et al.
Publicado: (2023)

Targeting the metastatic niche: Single-cell lineage tracing in prime time
por: Sommer, Elijah R., et al.
Publicado: (2023)

Comparative analysis of cell lineage differentiation during hepatogenesis in humans and mice at the single-cell transcriptome level
por: Wang, Xin, et al.
Publicado: (2020)

Single-cell sequencing reveals lineage-specific dynamic genetic regulation of gene expression during human cardiomyocyte differentiation
por: Elorbany, Reem, et al.
Publicado: (2022)

The Lineage Differentiation and Dynamic Heterogeneity of Thymic Epithelial Cells During Thymus Organogenesis
por: Gao, Hanchao, et al.
Publicado: (2022)

Parameter inference for stochastic single-cell dynamics from lineage tree data
por: Kuzmanovska, Irena, et al.
Publicado: (2017)

Dynamics of Epithelial–Mesenchymal Plasticity: What Have Single-Cell Investigations Elucidated So Far?
por: Subhadarshini, Seemadri, et al.
Publicado: (2023)

Murine B cell differentiation lineages
Publicado: (1984)

Local chromatin dynamics of transcription factors imply cell-lineage specific functions during cellular differentiation
por: Tian, Rui, et al.
Publicado: (2012)

Time-course single-cell RNA sequencing reveals transcriptional dynamics and heterogeneity of limbal stem cells derived from human pluripotent stem cells
por: Sun, Changbin, et al.
Publicado: (2021)

Extracting Fluorescent Reporter Time Courses of Cell Lineages from High-Throughput Microscopy at Low Temporal Resolution
por: Downey, Mike J., et al.
Publicado: (2011)

The Dynamic Proteome of Oligodendrocyte Lineage Differentiation Features Planar Cell Polarity and Macroautophagy Pathways
por: Pooyan, Paria, et al.
Publicado: (2020)

Genome architecture plasticity underlies DNA replication timing dynamics in cell differentiation
por: Yu, Wenjun, et al.
Publicado: (2022)

Emergent dynamics of adult stem cell lineages from single nucleus and single cell RNA-Seq of Drosophila testes
por: Raz, Amelie A, et al.
Publicado: (2023)

Hybrid cells differentiate to hepatic lineage cells and repair oxidative damage
por: Xu, Dan, et al.
Publicado: (2010)

Time space and single-cell resolved tissue lineage trajectories and laterality of body plan at gastrulation
por: Wang, Ran, et al.
Publicado: (2023)

Regulatory Dynamics of Cell Differentiation Revealed by True Time Series From Multinucleate Single Cells
por: Pretschner, Anna, et al.
Publicado: (2021)

Relating individual cell division events to single-cell ERK and Akt activity time courses
por: Stern, Alan D., et al.
Publicado: (2022)

Cell lineage and communication network inference via optimization for single-cell transcriptomics
por: Wang, Shuxiong, et al.
Publicado: (2019)

In vivo bioluminescence imaging to elucidate stem cell graft differentiation
por: Vogel, Stefanie, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_uak8jtfao783pa7v18714148at