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Prediction of IDH1 gene mutation by a nomogram based on multiparametric and multiregional MR images

OBJECTIVE: To investigate the value of a nomogram based on multiparametric and multiregional MR images to predict Isocitrate Dehydrogenase-1 (IDH1) gene mutations in glioma. DATA AND METHODS: The authors performed a retrospective analysis of 110 MR images of surgically confirmed pathological gliomas...

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Autores principales: Zheng, Jinjing, Dong, Haibo, Li, Ming, Lin, Xueyao, Wang, Chaochao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hospital das Clinicas da Faculdade de Medicina da Universidade de Sao Paulo 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10329099/
https://www.ncbi.nlm.nih.gov/pubmed/37354775
http://dx.doi.org/10.1016/j.clinsp.2023.100238
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author Zheng, Jinjing
Dong, Haibo
Li, Ming
Lin, Xueyao
Wang, Chaochao
author_facet Zheng, Jinjing
Dong, Haibo
Li, Ming
Lin, Xueyao
Wang, Chaochao
author_sort Zheng, Jinjing
collection PubMed
description OBJECTIVE: To investigate the value of a nomogram based on multiparametric and multiregional MR images to predict Isocitrate Dehydrogenase-1 (IDH1) gene mutations in glioma. DATA AND METHODS: The authors performed a retrospective analysis of 110 MR images of surgically confirmed pathological gliomas; 33 patients with IDH1 gene Mutation (IDH1-M) and 77 patients with Wild-type IDH1 (IDH1-W) were divided into training and validation sets in a 7:3 ratio. The clinical features were statistically analyzed using SPSS and R software. Three glioma regions (rCET, rE, rNEC) were outlined using ITK-SNAP software and projected to four conventional sequences (T1, T2, Flair, T1C) for feature extraction using AI-Kit software. The extracted features were screened using R software. A logistic regression model was established, and a nomogram was generated using the selected clinical features. Eight models were developed based on different sequences and ROIs, and Receiver Operating Characteristic (ROC) curves were used to evaluate the predictive efficacy. Decision curve analysis was performed to assess the clinical usefulness. RESULTS: Age was selected with Radscore to construct the nomogram. The Model 1 AUC values based on four sequences and three ROIs were the highest in these models, at 0.93 and 0.89, respectively. Decision curve analysis indicated that the net benefit of model 1 was higher than that of the other models for most Pt-values. CONCLUSION: A nomogram based on multiparametric and multiregional MR images can predict the mutation status of the IDH1 gene accurately.
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spelling pubmed-103290992023-07-09 Prediction of IDH1 gene mutation by a nomogram based on multiparametric and multiregional MR images Zheng, Jinjing Dong, Haibo Li, Ming Lin, Xueyao Wang, Chaochao Clinics (Sao Paulo) Original Articles OBJECTIVE: To investigate the value of a nomogram based on multiparametric and multiregional MR images to predict Isocitrate Dehydrogenase-1 (IDH1) gene mutations in glioma. DATA AND METHODS: The authors performed a retrospective analysis of 110 MR images of surgically confirmed pathological gliomas; 33 patients with IDH1 gene Mutation (IDH1-M) and 77 patients with Wild-type IDH1 (IDH1-W) were divided into training and validation sets in a 7:3 ratio. The clinical features were statistically analyzed using SPSS and R software. Three glioma regions (rCET, rE, rNEC) were outlined using ITK-SNAP software and projected to four conventional sequences (T1, T2, Flair, T1C) for feature extraction using AI-Kit software. The extracted features were screened using R software. A logistic regression model was established, and a nomogram was generated using the selected clinical features. Eight models were developed based on different sequences and ROIs, and Receiver Operating Characteristic (ROC) curves were used to evaluate the predictive efficacy. Decision curve analysis was performed to assess the clinical usefulness. RESULTS: Age was selected with Radscore to construct the nomogram. The Model 1 AUC values based on four sequences and three ROIs were the highest in these models, at 0.93 and 0.89, respectively. Decision curve analysis indicated that the net benefit of model 1 was higher than that of the other models for most Pt-values. CONCLUSION: A nomogram based on multiparametric and multiregional MR images can predict the mutation status of the IDH1 gene accurately. Hospital das Clinicas da Faculdade de Medicina da Universidade de Sao Paulo 2023-06-22 /pmc/articles/PMC10329099/ /pubmed/37354775 http://dx.doi.org/10.1016/j.clinsp.2023.100238 Text en © 2023 HCFMUSP. Published by Elsevier España, S.L.U. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Original Articles
Zheng, Jinjing
Dong, Haibo
Li, Ming
Lin, Xueyao
Wang, Chaochao
Prediction of IDH1 gene mutation by a nomogram based on multiparametric and multiregional MR images
title Prediction of IDH1 gene mutation by a nomogram based on multiparametric and multiregional MR images
title_full Prediction of IDH1 gene mutation by a nomogram based on multiparametric and multiregional MR images
title_fullStr Prediction of IDH1 gene mutation by a nomogram based on multiparametric and multiregional MR images
title_full_unstemmed Prediction of IDH1 gene mutation by a nomogram based on multiparametric and multiregional MR images
title_short Prediction of IDH1 gene mutation by a nomogram based on multiparametric and multiregional MR images
title_sort prediction of idh1 gene mutation by a nomogram based on multiparametric and multiregional mr images
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10329099/
https://www.ncbi.nlm.nih.gov/pubmed/37354775
http://dx.doi.org/10.1016/j.clinsp.2023.100238
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