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Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis

The mortality of heart failure after acute myocardial infarction (AMI) remains high. The aim of the present study was to analyze hub genes and immune infiltration in patients with AMI and heart failure (HF). The study utilized five publicly available gene expression datasets from peripheral blood in...

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Autores principales: Liu, Wei, Li, Yuling, Zhang, Yan, Li, Su, Chen, Yuqiong, Han, Bing, Lu, Yao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10329185/
https://www.ncbi.nlm.nih.gov/pubmed/37334672
http://dx.doi.org/10.1042/BSR20222552
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author Liu, Wei
Li, Yuling
Zhang, Yan
Li, Su
Chen, Yuqiong
Han, Bing
Lu, Yao
author_facet Liu, Wei
Li, Yuling
Zhang, Yan
Li, Su
Chen, Yuqiong
Han, Bing
Lu, Yao
author_sort Liu, Wei
collection PubMed
description The mortality of heart failure after acute myocardial infarction (AMI) remains high. The aim of the present study was to analyze hub genes and immune infiltration in patients with AMI and heart failure (HF). The study utilized five publicly available gene expression datasets from peripheral blood in patients with AMI who either developed or did not develop HF. The unbiased patterns of 24 immune cell were estimated by xCell algorithm. Single-cell RNA sequencing data were used to examine the immune cell infiltration in heart failure patients. Hub genes were validated by quantitative reverse transcription-PCR (RT-qPCR). In comparison with the coronary heart disease (CHD) group, immune infiltration analysis of AMI patients showed that macrophages M1, macrophages, monocytes, natural killer (NK) cells, and NKT cells were the five most highly activated cell types. Five common immune-related genes (S100A12, AQP9, CSF3R, S100A9, and CD14) were identified as hub genes associated with AMI. Using RT-qPCR, we confirmed FOS, DUSP1, CXCL8, and NFKBIA as the potential biomarkers to identify AMI patients at risk of HF. The study identified several transcripts that differentiate between AMI and CHD, and between HF and non-HF patients. These findings could improve our understanding of the immune response in AMI and HF, and allow for early identification of AMI patients at risk of HF.
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spelling pubmed-103291852023-07-09 Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis Liu, Wei Li, Yuling Zhang, Yan Li, Su Chen, Yuqiong Han, Bing Lu, Yao Biosci Rep Cardiovascular System & Vascular Biology The mortality of heart failure after acute myocardial infarction (AMI) remains high. The aim of the present study was to analyze hub genes and immune infiltration in patients with AMI and heart failure (HF). The study utilized five publicly available gene expression datasets from peripheral blood in patients with AMI who either developed or did not develop HF. The unbiased patterns of 24 immune cell were estimated by xCell algorithm. Single-cell RNA sequencing data were used to examine the immune cell infiltration in heart failure patients. Hub genes were validated by quantitative reverse transcription-PCR (RT-qPCR). In comparison with the coronary heart disease (CHD) group, immune infiltration analysis of AMI patients showed that macrophages M1, macrophages, monocytes, natural killer (NK) cells, and NKT cells were the five most highly activated cell types. Five common immune-related genes (S100A12, AQP9, CSF3R, S100A9, and CD14) were identified as hub genes associated with AMI. Using RT-qPCR, we confirmed FOS, DUSP1, CXCL8, and NFKBIA as the potential biomarkers to identify AMI patients at risk of HF. The study identified several transcripts that differentiate between AMI and CHD, and between HF and non-HF patients. These findings could improve our understanding of the immune response in AMI and HF, and allow for early identification of AMI patients at risk of HF. Portland Press Ltd. 2023-07-07 /pmc/articles/PMC10329185/ /pubmed/37334672 http://dx.doi.org/10.1042/BSR20222552 Text en © 2023 The Author(s). https://creativecommons.org/licenses/by/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Cardiovascular System & Vascular Biology
Liu, Wei
Li, Yuling
Zhang, Yan
Li, Su
Chen, Yuqiong
Han, Bing
Lu, Yao
Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis
title Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis
title_full Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis
title_fullStr Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis
title_full_unstemmed Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis
title_short Identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis
title_sort identification of biomarkers and immune infiltration in acute myocardial infarction and heart failure by integrated analysis
topic Cardiovascular System & Vascular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10329185/
https://www.ncbi.nlm.nih.gov/pubmed/37334672
http://dx.doi.org/10.1042/BSR20222552
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