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Automated machine learning (AutoML) can predict 90-day mortality after gastrectomy for cancer
Early postoperative mortality risk prediction is crucial for clinical management of gastric cancer. This study aims to predict 90-day mortality in gastric cancer patients undergoing gastrectomy using automated machine learning (AutoML), optimize models for preoperative prediction, and identify facto...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10329647/ https://www.ncbi.nlm.nih.gov/pubmed/37422500 http://dx.doi.org/10.1038/s41598-023-37396-3 |
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author | SenthilKumar, Gopika Madhusudhana, Sharadhi Flitcroft, Madelyn Sheriff, Salma Thalji, Samih Merrill, Jennifer Clarke, Callisia N. Maduekwe, Ugwuji N. Tsai, Susan Christians, Kathleen K. Gamblin, T. Clark Kothari, Anai N. |
author_facet | SenthilKumar, Gopika Madhusudhana, Sharadhi Flitcroft, Madelyn Sheriff, Salma Thalji, Samih Merrill, Jennifer Clarke, Callisia N. Maduekwe, Ugwuji N. Tsai, Susan Christians, Kathleen K. Gamblin, T. Clark Kothari, Anai N. |
author_sort | SenthilKumar, Gopika |
collection | PubMed |
description | Early postoperative mortality risk prediction is crucial for clinical management of gastric cancer. This study aims to predict 90-day mortality in gastric cancer patients undergoing gastrectomy using automated machine learning (AutoML), optimize models for preoperative prediction, and identify factors influential in prediction. National Cancer Database was used to identify stage I–III gastric cancer patients undergoing gastrectomy between 2004 and 2016. 26 features were used to train predictive models using H2O.ai AutoML. Performance on validation cohort was measured. In 39,108 patients, 90-day mortality rate was 8.8%. The highest performing model was an ensemble (AUC = 0.77); older age, nodal ratio, and length of inpatient stay (LOS) following surgery were most influential for prediction. Removing the latter two parameters decreased model performance (AUC 0.71). For optimizing models for preoperative use, models were developed to first predict node ratio or LOS, and these predicted values were inputted for 90-day mortality prediction (AUC of 0.73–0.74). AutoML performed well in predicting 90-day mortality in a larger cohort of gastric cancer patients that underwent gastrectomy. These models can be implemented preoperatively to inform prognostication and patient selection for surgery. Our study supports broader evaluation and application of AutoML to guide surgical oncologic care. |
format | Online Article Text |
id | pubmed-10329647 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-103296472023-07-10 Automated machine learning (AutoML) can predict 90-day mortality after gastrectomy for cancer SenthilKumar, Gopika Madhusudhana, Sharadhi Flitcroft, Madelyn Sheriff, Salma Thalji, Samih Merrill, Jennifer Clarke, Callisia N. Maduekwe, Ugwuji N. Tsai, Susan Christians, Kathleen K. Gamblin, T. Clark Kothari, Anai N. Sci Rep Article Early postoperative mortality risk prediction is crucial for clinical management of gastric cancer. This study aims to predict 90-day mortality in gastric cancer patients undergoing gastrectomy using automated machine learning (AutoML), optimize models for preoperative prediction, and identify factors influential in prediction. National Cancer Database was used to identify stage I–III gastric cancer patients undergoing gastrectomy between 2004 and 2016. 26 features were used to train predictive models using H2O.ai AutoML. Performance on validation cohort was measured. In 39,108 patients, 90-day mortality rate was 8.8%. The highest performing model was an ensemble (AUC = 0.77); older age, nodal ratio, and length of inpatient stay (LOS) following surgery were most influential for prediction. Removing the latter two parameters decreased model performance (AUC 0.71). For optimizing models for preoperative use, models were developed to first predict node ratio or LOS, and these predicted values were inputted for 90-day mortality prediction (AUC of 0.73–0.74). AutoML performed well in predicting 90-day mortality in a larger cohort of gastric cancer patients that underwent gastrectomy. These models can be implemented preoperatively to inform prognostication and patient selection for surgery. Our study supports broader evaluation and application of AutoML to guide surgical oncologic care. Nature Publishing Group UK 2023-07-08 /pmc/articles/PMC10329647/ /pubmed/37422500 http://dx.doi.org/10.1038/s41598-023-37396-3 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article SenthilKumar, Gopika Madhusudhana, Sharadhi Flitcroft, Madelyn Sheriff, Salma Thalji, Samih Merrill, Jennifer Clarke, Callisia N. Maduekwe, Ugwuji N. Tsai, Susan Christians, Kathleen K. Gamblin, T. Clark Kothari, Anai N. Automated machine learning (AutoML) can predict 90-day mortality after gastrectomy for cancer |
title | Automated machine learning (AutoML) can predict 90-day mortality after gastrectomy for cancer |
title_full | Automated machine learning (AutoML) can predict 90-day mortality after gastrectomy for cancer |
title_fullStr | Automated machine learning (AutoML) can predict 90-day mortality after gastrectomy for cancer |
title_full_unstemmed | Automated machine learning (AutoML) can predict 90-day mortality after gastrectomy for cancer |
title_short | Automated machine learning (AutoML) can predict 90-day mortality after gastrectomy for cancer |
title_sort | automated machine learning (automl) can predict 90-day mortality after gastrectomy for cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10329647/ https://www.ncbi.nlm.nih.gov/pubmed/37422500 http://dx.doi.org/10.1038/s41598-023-37396-3 |
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