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Beyond the Status Quo: Density Functional Tight Binding and Neural Network Potentials as a Versatile Simulation Strategy to Characterize Host–Guest Interactions in Metal- and Covalent Organic Frameworks

[Image: see text] In recent years, research focused on synthesis, characterization, and application of metal–organic frameworks (MOFs) has attracted increased interest, from both an experimental as well as a theoretical perspective. Self-consistent charge density functional tight binding (SCC DFTB)...

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Autores principales: Hofer, Thomas S., Listyarini, Risnita Vicky, Hajdarevic, Emir, Maier, Lukas, Purtscher, Felix R. S., Gamper, Jakob, Hanser, Friedrich
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10331828/
https://www.ncbi.nlm.nih.gov/pubmed/37352552
http://dx.doi.org/10.1021/acs.jpclett.3c00941
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author Hofer, Thomas S.
Listyarini, Risnita Vicky
Hajdarevic, Emir
Maier, Lukas
Purtscher, Felix R. S.
Gamper, Jakob
Hanser, Friedrich
author_facet Hofer, Thomas S.
Listyarini, Risnita Vicky
Hajdarevic, Emir
Maier, Lukas
Purtscher, Felix R. S.
Gamper, Jakob
Hanser, Friedrich
author_sort Hofer, Thomas S.
collection PubMed
description [Image: see text] In recent years, research focused on synthesis, characterization, and application of metal–organic frameworks (MOFs) has attracted increased interest, from both an experimental as well as a theoretical perspective. Self-consistent charge density functional tight binding (SCC DFTB) in conjunction with a suitable constrained molecular dynamics (MD) simulation protocol provides a versatile and flexible platform for the study of pristine MOFs as well as guest@MOF systems. Although being a semi-empirical quantum mechanical method, SCC DFTB inherently accounts for polarization and many-body contributions, which may become a limiting factor in purely force field-based simulation studies. A number of examples such as CO(2), indigo, and drug molecules embedded in various MOF hosts are discussed to highlight the capabilities of the presented simulation approach. Furthermore, a promising extension of the outlined simulation strategy toward the treatment of covalent organic frameworks utilizing state-of-the-art neural network potentials providing a description at DFT accuracy and force field cost is outlined.
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spelling pubmed-103318282023-07-11 Beyond the Status Quo: Density Functional Tight Binding and Neural Network Potentials as a Versatile Simulation Strategy to Characterize Host–Guest Interactions in Metal- and Covalent Organic Frameworks Hofer, Thomas S. Listyarini, Risnita Vicky Hajdarevic, Emir Maier, Lukas Purtscher, Felix R. S. Gamper, Jakob Hanser, Friedrich J Phys Chem Lett [Image: see text] In recent years, research focused on synthesis, characterization, and application of metal–organic frameworks (MOFs) has attracted increased interest, from both an experimental as well as a theoretical perspective. Self-consistent charge density functional tight binding (SCC DFTB) in conjunction with a suitable constrained molecular dynamics (MD) simulation protocol provides a versatile and flexible platform for the study of pristine MOFs as well as guest@MOF systems. Although being a semi-empirical quantum mechanical method, SCC DFTB inherently accounts for polarization and many-body contributions, which may become a limiting factor in purely force field-based simulation studies. A number of examples such as CO(2), indigo, and drug molecules embedded in various MOF hosts are discussed to highlight the capabilities of the presented simulation approach. Furthermore, a promising extension of the outlined simulation strategy toward the treatment of covalent organic frameworks utilizing state-of-the-art neural network potentials providing a description at DFT accuracy and force field cost is outlined. American Chemical Society 2023-06-23 /pmc/articles/PMC10331828/ /pubmed/37352552 http://dx.doi.org/10.1021/acs.jpclett.3c00941 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Hofer, Thomas S.
Listyarini, Risnita Vicky
Hajdarevic, Emir
Maier, Lukas
Purtscher, Felix R. S.
Gamper, Jakob
Hanser, Friedrich
Beyond the Status Quo: Density Functional Tight Binding and Neural Network Potentials as a Versatile Simulation Strategy to Characterize Host–Guest Interactions in Metal- and Covalent Organic Frameworks
title Beyond the Status Quo: Density Functional Tight Binding and Neural Network Potentials as a Versatile Simulation Strategy to Characterize Host–Guest Interactions in Metal- and Covalent Organic Frameworks
title_full Beyond the Status Quo: Density Functional Tight Binding and Neural Network Potentials as a Versatile Simulation Strategy to Characterize Host–Guest Interactions in Metal- and Covalent Organic Frameworks
title_fullStr Beyond the Status Quo: Density Functional Tight Binding and Neural Network Potentials as a Versatile Simulation Strategy to Characterize Host–Guest Interactions in Metal- and Covalent Organic Frameworks
title_full_unstemmed Beyond the Status Quo: Density Functional Tight Binding and Neural Network Potentials as a Versatile Simulation Strategy to Characterize Host–Guest Interactions in Metal- and Covalent Organic Frameworks
title_short Beyond the Status Quo: Density Functional Tight Binding and Neural Network Potentials as a Versatile Simulation Strategy to Characterize Host–Guest Interactions in Metal- and Covalent Organic Frameworks
title_sort beyond the status quo: density functional tight binding and neural network potentials as a versatile simulation strategy to characterize host–guest interactions in metal- and covalent organic frameworks
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10331828/
https://www.ncbi.nlm.nih.gov/pubmed/37352552
http://dx.doi.org/10.1021/acs.jpclett.3c00941
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