Cargando…
Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification
INTRODUCTION: This study aims to develop a web application, TB-DRD-CXR, for the categorization of tuberculosis (TB) patients into subgroups based on their level of drug resistance. The application utilizes an ensemble deep learning model that classifies TB strains into five subtypes: drug sensitive...
Autores principales: | , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333053/ https://www.ncbi.nlm.nih.gov/pubmed/37441685 http://dx.doi.org/10.3389/fmed.2023.1122222 |
_version_ | 1785070571648712704 |
---|---|
author | Sethanan, Kanchana Pitakaso, Rapeepan Srichok, Thanatkij Khonjun, Surajet Weerayuth, Nantawatana Prasitpuriprecha, Chutinun Preeprem, Thanawadee Jantama, Sirima Suvarnakuta Gonwirat, Sarayut Enkvetchakul, Prem Kaewta, Chutchai Nanthasamroeng, Natthapong |
author_facet | Sethanan, Kanchana Pitakaso, Rapeepan Srichok, Thanatkij Khonjun, Surajet Weerayuth, Nantawatana Prasitpuriprecha, Chutinun Preeprem, Thanawadee Jantama, Sirima Suvarnakuta Gonwirat, Sarayut Enkvetchakul, Prem Kaewta, Chutchai Nanthasamroeng, Natthapong |
author_sort | Sethanan, Kanchana |
collection | PubMed |
description | INTRODUCTION: This study aims to develop a web application, TB-DRD-CXR, for the categorization of tuberculosis (TB) patients into subgroups based on their level of drug resistance. The application utilizes an ensemble deep learning model that classifies TB strains into five subtypes: drug sensitive tuberculosis (DS-TB), drug resistant TB (DR-TB), multidrug-resistant TB (MDR-TB), pre-extensively drug-resistant TB (pre-XDR-TB), and extensively drug-resistant TB (XDR-TB). METHODS: The ensemble deep learning model employed in the TB-DRD-CXR web application incorporates novel fusion techniques, image segmentation, data augmentation, and various learning rate strategies. The performance of the proposed model is compared with state-of-the-art techniques and standard homogeneous CNN architectures documented in the literature. RESULTS: Computational results indicate that the suggested method outperforms existing methods reported in the literature, providing a 4.0%-33.9% increase in accuracy. Moreover, the proposed model demonstrates superior performance compared to standard CNN models, including DenseNet201, NASNetMobile, EfficientNetB7, EfficientNetV2B3, EfficientNetV2M, and ConvNeXtSmall, with accuracy improvements of 28.8%, 93.4%, 2.99%, 48.0%, 4.4%, and 7.6% respectively. CONCLUSION: The TB-DRD-CXR web application was developed and tested with 33 medical staff. The computational results showed a high accuracy rate of 96.7%, time-based efficiency (ET) of 4.16 goals/minutes, and an overall relative efficiency (ORE) of 100%. The system usability scale (SUS) score of the proposed application is 96.7%, indicating user satisfaction and a likelihood of recommending the TB-DRD-CXR application to others based on previous literature. |
format | Online Article Text |
id | pubmed-10333053 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103330532023-07-12 Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification Sethanan, Kanchana Pitakaso, Rapeepan Srichok, Thanatkij Khonjun, Surajet Weerayuth, Nantawatana Prasitpuriprecha, Chutinun Preeprem, Thanawadee Jantama, Sirima Suvarnakuta Gonwirat, Sarayut Enkvetchakul, Prem Kaewta, Chutchai Nanthasamroeng, Natthapong Front Med (Lausanne) Medicine INTRODUCTION: This study aims to develop a web application, TB-DRD-CXR, for the categorization of tuberculosis (TB) patients into subgroups based on their level of drug resistance. The application utilizes an ensemble deep learning model that classifies TB strains into five subtypes: drug sensitive tuberculosis (DS-TB), drug resistant TB (DR-TB), multidrug-resistant TB (MDR-TB), pre-extensively drug-resistant TB (pre-XDR-TB), and extensively drug-resistant TB (XDR-TB). METHODS: The ensemble deep learning model employed in the TB-DRD-CXR web application incorporates novel fusion techniques, image segmentation, data augmentation, and various learning rate strategies. The performance of the proposed model is compared with state-of-the-art techniques and standard homogeneous CNN architectures documented in the literature. RESULTS: Computational results indicate that the suggested method outperforms existing methods reported in the literature, providing a 4.0%-33.9% increase in accuracy. Moreover, the proposed model demonstrates superior performance compared to standard CNN models, including DenseNet201, NASNetMobile, EfficientNetB7, EfficientNetV2B3, EfficientNetV2M, and ConvNeXtSmall, with accuracy improvements of 28.8%, 93.4%, 2.99%, 48.0%, 4.4%, and 7.6% respectively. CONCLUSION: The TB-DRD-CXR web application was developed and tested with 33 medical staff. The computational results showed a high accuracy rate of 96.7%, time-based efficiency (ET) of 4.16 goals/minutes, and an overall relative efficiency (ORE) of 100%. The system usability scale (SUS) score of the proposed application is 96.7%, indicating user satisfaction and a likelihood of recommending the TB-DRD-CXR application to others based on previous literature. Frontiers Media S.A. 2023-06-26 /pmc/articles/PMC10333053/ /pubmed/37441685 http://dx.doi.org/10.3389/fmed.2023.1122222 Text en Copyright © 2023 Sethanan, Pitakaso, Srichok, Khonjun, Weerayuth, Prasitpuriprecha, Preeprem, Jantama, Gonwirat, Enkvetchakul, Kaewta and Nanthasamroeng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Sethanan, Kanchana Pitakaso, Rapeepan Srichok, Thanatkij Khonjun, Surajet Weerayuth, Nantawatana Prasitpuriprecha, Chutinun Preeprem, Thanawadee Jantama, Sirima Suvarnakuta Gonwirat, Sarayut Enkvetchakul, Prem Kaewta, Chutchai Nanthasamroeng, Natthapong Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification |
title | Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification |
title_full | Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification |
title_fullStr | Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification |
title_full_unstemmed | Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification |
title_short | Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification |
title_sort | computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333053/ https://www.ncbi.nlm.nih.gov/pubmed/37441685 http://dx.doi.org/10.3389/fmed.2023.1122222 |
work_keys_str_mv | AT sethanankanchana computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT pitakasorapeepan computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT srichokthanatkij computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT khonjunsurajet computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT weerayuthnantawatana computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT prasitpuriprechachutinun computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT preepremthanawadee computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT jantamasirimasuvarnakuta computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT gonwiratsarayut computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT enkvetchakulprem computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT kaewtachutchai computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification AT nanthasamroengnatthapong computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification |