Cargando…

Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification

INTRODUCTION: This study aims to develop a web application, TB-DRD-CXR, for the categorization of tuberculosis (TB) patients into subgroups based on their level of drug resistance. The application utilizes an ensemble deep learning model that classifies TB strains into five subtypes: drug sensitive...

Descripción completa

Detalles Bibliográficos
Autores principales: Sethanan, Kanchana, Pitakaso, Rapeepan, Srichok, Thanatkij, Khonjun, Surajet, Weerayuth, Nantawatana, Prasitpuriprecha, Chutinun, Preeprem, Thanawadee, Jantama, Sirima Suvarnakuta, Gonwirat, Sarayut, Enkvetchakul, Prem, Kaewta, Chutchai, Nanthasamroeng, Natthapong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333053/
https://www.ncbi.nlm.nih.gov/pubmed/37441685
http://dx.doi.org/10.3389/fmed.2023.1122222
_version_ 1785070571648712704
author Sethanan, Kanchana
Pitakaso, Rapeepan
Srichok, Thanatkij
Khonjun, Surajet
Weerayuth, Nantawatana
Prasitpuriprecha, Chutinun
Preeprem, Thanawadee
Jantama, Sirima Suvarnakuta
Gonwirat, Sarayut
Enkvetchakul, Prem
Kaewta, Chutchai
Nanthasamroeng, Natthapong
author_facet Sethanan, Kanchana
Pitakaso, Rapeepan
Srichok, Thanatkij
Khonjun, Surajet
Weerayuth, Nantawatana
Prasitpuriprecha, Chutinun
Preeprem, Thanawadee
Jantama, Sirima Suvarnakuta
Gonwirat, Sarayut
Enkvetchakul, Prem
Kaewta, Chutchai
Nanthasamroeng, Natthapong
author_sort Sethanan, Kanchana
collection PubMed
description INTRODUCTION: This study aims to develop a web application, TB-DRD-CXR, for the categorization of tuberculosis (TB) patients into subgroups based on their level of drug resistance. The application utilizes an ensemble deep learning model that classifies TB strains into five subtypes: drug sensitive tuberculosis (DS-TB), drug resistant TB (DR-TB), multidrug-resistant TB (MDR-TB), pre-extensively drug-resistant TB (pre-XDR-TB), and extensively drug-resistant TB (XDR-TB). METHODS: The ensemble deep learning model employed in the TB-DRD-CXR web application incorporates novel fusion techniques, image segmentation, data augmentation, and various learning rate strategies. The performance of the proposed model is compared with state-of-the-art techniques and standard homogeneous CNN architectures documented in the literature. RESULTS: Computational results indicate that the suggested method outperforms existing methods reported in the literature, providing a 4.0%-33.9% increase in accuracy. Moreover, the proposed model demonstrates superior performance compared to standard CNN models, including DenseNet201, NASNetMobile, EfficientNetB7, EfficientNetV2B3, EfficientNetV2M, and ConvNeXtSmall, with accuracy improvements of 28.8%, 93.4%, 2.99%, 48.0%, 4.4%, and 7.6% respectively. CONCLUSION: The TB-DRD-CXR web application was developed and tested with 33 medical staff. The computational results showed a high accuracy rate of 96.7%, time-based efficiency (ET) of 4.16 goals/minutes, and an overall relative efficiency (ORE) of 100%. The system usability scale (SUS) score of the proposed application is 96.7%, indicating user satisfaction and a likelihood of recommending the TB-DRD-CXR application to others based on previous literature.
format Online
Article
Text
id pubmed-10333053
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-103330532023-07-12 Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification Sethanan, Kanchana Pitakaso, Rapeepan Srichok, Thanatkij Khonjun, Surajet Weerayuth, Nantawatana Prasitpuriprecha, Chutinun Preeprem, Thanawadee Jantama, Sirima Suvarnakuta Gonwirat, Sarayut Enkvetchakul, Prem Kaewta, Chutchai Nanthasamroeng, Natthapong Front Med (Lausanne) Medicine INTRODUCTION: This study aims to develop a web application, TB-DRD-CXR, for the categorization of tuberculosis (TB) patients into subgroups based on their level of drug resistance. The application utilizes an ensemble deep learning model that classifies TB strains into five subtypes: drug sensitive tuberculosis (DS-TB), drug resistant TB (DR-TB), multidrug-resistant TB (MDR-TB), pre-extensively drug-resistant TB (pre-XDR-TB), and extensively drug-resistant TB (XDR-TB). METHODS: The ensemble deep learning model employed in the TB-DRD-CXR web application incorporates novel fusion techniques, image segmentation, data augmentation, and various learning rate strategies. The performance of the proposed model is compared with state-of-the-art techniques and standard homogeneous CNN architectures documented in the literature. RESULTS: Computational results indicate that the suggested method outperforms existing methods reported in the literature, providing a 4.0%-33.9% increase in accuracy. Moreover, the proposed model demonstrates superior performance compared to standard CNN models, including DenseNet201, NASNetMobile, EfficientNetB7, EfficientNetV2B3, EfficientNetV2M, and ConvNeXtSmall, with accuracy improvements of 28.8%, 93.4%, 2.99%, 48.0%, 4.4%, and 7.6% respectively. CONCLUSION: The TB-DRD-CXR web application was developed and tested with 33 medical staff. The computational results showed a high accuracy rate of 96.7%, time-based efficiency (ET) of 4.16 goals/minutes, and an overall relative efficiency (ORE) of 100%. The system usability scale (SUS) score of the proposed application is 96.7%, indicating user satisfaction and a likelihood of recommending the TB-DRD-CXR application to others based on previous literature. Frontiers Media S.A. 2023-06-26 /pmc/articles/PMC10333053/ /pubmed/37441685 http://dx.doi.org/10.3389/fmed.2023.1122222 Text en Copyright © 2023 Sethanan, Pitakaso, Srichok, Khonjun, Weerayuth, Prasitpuriprecha, Preeprem, Jantama, Gonwirat, Enkvetchakul, Kaewta and Nanthasamroeng. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Sethanan, Kanchana
Pitakaso, Rapeepan
Srichok, Thanatkij
Khonjun, Surajet
Weerayuth, Nantawatana
Prasitpuriprecha, Chutinun
Preeprem, Thanawadee
Jantama, Sirima Suvarnakuta
Gonwirat, Sarayut
Enkvetchakul, Prem
Kaewta, Chutchai
Nanthasamroeng, Natthapong
Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification
title Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification
title_full Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification
title_fullStr Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification
title_full_unstemmed Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification
title_short Computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification
title_sort computer-aided diagnosis using embedded ensemble deep learning for multiclass drug-resistant tuberculosis classification
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333053/
https://www.ncbi.nlm.nih.gov/pubmed/37441685
http://dx.doi.org/10.3389/fmed.2023.1122222
work_keys_str_mv AT sethanankanchana computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT pitakasorapeepan computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT srichokthanatkij computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT khonjunsurajet computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT weerayuthnantawatana computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT prasitpuriprechachutinun computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT preepremthanawadee computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT jantamasirimasuvarnakuta computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT gonwiratsarayut computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT enkvetchakulprem computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT kaewtachutchai computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification
AT nanthasamroengnatthapong computeraideddiagnosisusingembeddedensembledeeplearningformulticlassdrugresistanttuberculosisclassification