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Identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes
To explore effects of aging-related genes (ARGs) on the prognosis of Acute Myeloid Leukemia (AML), a seven-ARGs signature was developed and validated in AML patients. The numbers of seven-ARG sequences were selected to construct the survival prognostic signature in TCGA-LAML cohort, and two GEO data...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333094/ https://www.ncbi.nlm.nih.gov/pubmed/37367950 http://dx.doi.org/10.18632/aging.204843 |
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author | Ke, Peng Zhu, Qian Xu, Ting Yang, Xiaofei Wang, Ying Qiu, Huiying Wu, Depei Bao, Xiebing Chen, Suning |
author_facet | Ke, Peng Zhu, Qian Xu, Ting Yang, Xiaofei Wang, Ying Qiu, Huiying Wu, Depei Bao, Xiebing Chen, Suning |
author_sort | Ke, Peng |
collection | PubMed |
description | To explore effects of aging-related genes (ARGs) on the prognosis of Acute Myeloid Leukemia (AML), a seven-ARGs signature was developed and validated in AML patients. The numbers of seven-ARG sequences were selected to construct the survival prognostic signature in TCGA-LAML cohort, and two GEO datasets were used independently to verify the prognostic values of signature. According to seven-ARGs signature, patients were categorized into two subgroups. Patients with high-risk prognostic score were defined as HRPS-group/high-risk group, while others were set as LRPS-group/low-risk group. HRPS-group presented adverse overall survival (OS) than LRPS-group in TCGA-AML cohort (HR=3.39, P<0.001). In validation, the results emphasized a satisfactory discrimination in different time points, and confirmed the poor OS of HRPS-group both in GSE37642 (HR=1.96, P=0.001) and GSE106291 (HR=1.88, P<0.001). Many signal pathways, including immune- and tumor-related processes, especially NF-κB signaling, were highly enriched in HRPS-group. Coupled with high immune-inflamed infiltration, the HRPS-group was highly associated with the driver gene and oncogenic signaling pathway of TP53. Prediction of blockade therapy targeting immune checkpoint indicated varied benefits base on the different ARGs signature score, and the results of predicted drug response suggested that Pevonedistat, an inhibitor of NEDD8-activating enzyme, targeting NF-κB signaling, may have potential therapeutic value for HRPS-group. Compared with clinical factors alone, the signature had an independent value and more predictive power of AML prognosis. The 7-ARGs signature may help to guide clinical-decision making to predict drug response, and survival in AML patients. |
format | Online Article Text |
id | pubmed-10333094 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-103330942023-07-12 Identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes Ke, Peng Zhu, Qian Xu, Ting Yang, Xiaofei Wang, Ying Qiu, Huiying Wu, Depei Bao, Xiebing Chen, Suning Aging (Albany NY) Research Paper To explore effects of aging-related genes (ARGs) on the prognosis of Acute Myeloid Leukemia (AML), a seven-ARGs signature was developed and validated in AML patients. The numbers of seven-ARG sequences were selected to construct the survival prognostic signature in TCGA-LAML cohort, and two GEO datasets were used independently to verify the prognostic values of signature. According to seven-ARGs signature, patients were categorized into two subgroups. Patients with high-risk prognostic score were defined as HRPS-group/high-risk group, while others were set as LRPS-group/low-risk group. HRPS-group presented adverse overall survival (OS) than LRPS-group in TCGA-AML cohort (HR=3.39, P<0.001). In validation, the results emphasized a satisfactory discrimination in different time points, and confirmed the poor OS of HRPS-group both in GSE37642 (HR=1.96, P=0.001) and GSE106291 (HR=1.88, P<0.001). Many signal pathways, including immune- and tumor-related processes, especially NF-κB signaling, were highly enriched in HRPS-group. Coupled with high immune-inflamed infiltration, the HRPS-group was highly associated with the driver gene and oncogenic signaling pathway of TP53. Prediction of blockade therapy targeting immune checkpoint indicated varied benefits base on the different ARGs signature score, and the results of predicted drug response suggested that Pevonedistat, an inhibitor of NEDD8-activating enzyme, targeting NF-κB signaling, may have potential therapeutic value for HRPS-group. Compared with clinical factors alone, the signature had an independent value and more predictive power of AML prognosis. The 7-ARGs signature may help to guide clinical-decision making to predict drug response, and survival in AML patients. Impact Journals 2023-06-26 /pmc/articles/PMC10333094/ /pubmed/37367950 http://dx.doi.org/10.18632/aging.204843 Text en Copyright: © 2023 Ke et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Ke, Peng Zhu, Qian Xu, Ting Yang, Xiaofei Wang, Ying Qiu, Huiying Wu, Depei Bao, Xiebing Chen, Suning Identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes |
title | Identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes |
title_full | Identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes |
title_fullStr | Identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes |
title_full_unstemmed | Identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes |
title_short | Identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes |
title_sort | identification and validation of a 7-genes prognostic signature for adult acute myeloid leukemia based on aging-related genes |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333094/ https://www.ncbi.nlm.nih.gov/pubmed/37367950 http://dx.doi.org/10.18632/aging.204843 |
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