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ORCA-SPY enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation

Acoustic identification of vocalizing individuals opens up new and deeper insights into animal communications, such as individual-/group-specific dialects, turn-taking events, and dialogs. However, establishing an association between an individual animal and its emitted signal is usually non-trivial...

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Autores principales: Hauer, Christopher, Nöth, Elmar, Barnhill, Alexander, Maier, Andreas, Guthunz, Julius, Hofer, Heribert, Cheng, Rachael Xi, Barth, Volker, Bergler, Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333356/
https://www.ncbi.nlm.nih.gov/pubmed/37429871
http://dx.doi.org/10.1038/s41598-023-38132-7
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author Hauer, Christopher
Nöth, Elmar
Barnhill, Alexander
Maier, Andreas
Guthunz, Julius
Hofer, Heribert
Cheng, Rachael Xi
Barth, Volker
Bergler, Christian
author_facet Hauer, Christopher
Nöth, Elmar
Barnhill, Alexander
Maier, Andreas
Guthunz, Julius
Hofer, Heribert
Cheng, Rachael Xi
Barth, Volker
Bergler, Christian
author_sort Hauer, Christopher
collection PubMed
description Acoustic identification of vocalizing individuals opens up new and deeper insights into animal communications, such as individual-/group-specific dialects, turn-taking events, and dialogs. However, establishing an association between an individual animal and its emitted signal is usually non-trivial, especially for animals underwater. Consequently, a collection of marine species-, array-, and position-specific ground truth localization data is extremely challenging, which strongly limits possibilities to evaluate localization methods beforehand or at all. This study presents ORCA-SPY, a fully-automated sound source simulation, classification and localization framework for passive killer whale (Orcinus orca) acoustic monitoring that is embedded into PAMGuard, a widely used bioacoustic software toolkit. ORCA-SPY enables array- and position-specific multichannel audio stream generation to simulate real-world ground truth killer whale localization data and provides a hybrid sound source identification approach integrating ANIMAL-SPOT, a state-of-the-art deep learning-based orca detection network, followed by downstream Time-Difference-Of-Arrival localization. ORCA-SPY was evaluated on simulated multichannel underwater audio streams including various killer whale vocalization events within a large-scale experimental setup benefiting from previous real-world fieldwork experience. Across all 58,320 embedded vocalizing killer whale events, subject to various hydrophone array geometries, call types, distances, and noise conditions responsible for a signal-to-noise ratio varying from [Formula: see text] dB to 3 dB, a detection rate of 94.0 % was achieved with an average localization error of 7.01[Formula: see text] . ORCA-SPY was field-tested on Lake Stechlin in Brandenburg Germany under laboratory conditions with a focus on localization. During the field test, 3889 localization events were observed with an average error of 29.19[Formula: see text] and a median error of 17.54[Formula: see text] . ORCA-SPY was deployed successfully during the DeepAL fieldwork 2022 expedition (DLFW22) in Northern British Columbia, with a mean average error of 20.01[Formula: see text] and a median error of 11.01[Formula: see text] across 503 localization events. ORCA-SPY is an open-source and publicly available software framework, which can be adapted to various recording conditions as well as animal species.
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spelling pubmed-103333562023-07-12 ORCA-SPY enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation Hauer, Christopher Nöth, Elmar Barnhill, Alexander Maier, Andreas Guthunz, Julius Hofer, Heribert Cheng, Rachael Xi Barth, Volker Bergler, Christian Sci Rep Article Acoustic identification of vocalizing individuals opens up new and deeper insights into animal communications, such as individual-/group-specific dialects, turn-taking events, and dialogs. However, establishing an association between an individual animal and its emitted signal is usually non-trivial, especially for animals underwater. Consequently, a collection of marine species-, array-, and position-specific ground truth localization data is extremely challenging, which strongly limits possibilities to evaluate localization methods beforehand or at all. This study presents ORCA-SPY, a fully-automated sound source simulation, classification and localization framework for passive killer whale (Orcinus orca) acoustic monitoring that is embedded into PAMGuard, a widely used bioacoustic software toolkit. ORCA-SPY enables array- and position-specific multichannel audio stream generation to simulate real-world ground truth killer whale localization data and provides a hybrid sound source identification approach integrating ANIMAL-SPOT, a state-of-the-art deep learning-based orca detection network, followed by downstream Time-Difference-Of-Arrival localization. ORCA-SPY was evaluated on simulated multichannel underwater audio streams including various killer whale vocalization events within a large-scale experimental setup benefiting from previous real-world fieldwork experience. Across all 58,320 embedded vocalizing killer whale events, subject to various hydrophone array geometries, call types, distances, and noise conditions responsible for a signal-to-noise ratio varying from [Formula: see text] dB to 3 dB, a detection rate of 94.0 % was achieved with an average localization error of 7.01[Formula: see text] . ORCA-SPY was field-tested on Lake Stechlin in Brandenburg Germany under laboratory conditions with a focus on localization. During the field test, 3889 localization events were observed with an average error of 29.19[Formula: see text] and a median error of 17.54[Formula: see text] . ORCA-SPY was deployed successfully during the DeepAL fieldwork 2022 expedition (DLFW22) in Northern British Columbia, with a mean average error of 20.01[Formula: see text] and a median error of 11.01[Formula: see text] across 503 localization events. ORCA-SPY is an open-source and publicly available software framework, which can be adapted to various recording conditions as well as animal species. Nature Publishing Group UK 2023-07-10 /pmc/articles/PMC10333356/ /pubmed/37429871 http://dx.doi.org/10.1038/s41598-023-38132-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Hauer, Christopher
Nöth, Elmar
Barnhill, Alexander
Maier, Andreas
Guthunz, Julius
Hofer, Heribert
Cheng, Rachael Xi
Barth, Volker
Bergler, Christian
ORCA-SPY enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation
title ORCA-SPY enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation
title_full ORCA-SPY enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation
title_fullStr ORCA-SPY enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation
title_full_unstemmed ORCA-SPY enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation
title_short ORCA-SPY enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation
title_sort orca-spy enables killer whale sound source simulation, detection, classification and localization using an integrated deep learning-based segmentation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333356/
https://www.ncbi.nlm.nih.gov/pubmed/37429871
http://dx.doi.org/10.1038/s41598-023-38132-7
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