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Predicting Soft Tissue Sarcoma Response to Neoadjuvant Chemotherapy Using an MRI-Based Delta-Radiomics Approach

OBJECTIVES: To evaluate the performance of machine learning–augmented MRI-based radiomics models for predicting response to neoadjuvant chemotherapy (NAC) in soft tissue sarcomas. METHODS: Forty-four subjects were identified retrospectively from patients who received NAC at our institution for patho...

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Autores principales: Fields, Brandon K. K., Demirjian, Natalie L., Cen, Steven Y., Varghese, Bino A., Hwang, Darryl H., Lei, Xiaomeng, Desai, Bhushan, Duddalwar, Vinay, Matcuk, George R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333397/
https://www.ncbi.nlm.nih.gov/pubmed/36695966
http://dx.doi.org/10.1007/s11307-023-01803-y
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author Fields, Brandon K. K.
Demirjian, Natalie L.
Cen, Steven Y.
Varghese, Bino A.
Hwang, Darryl H.
Lei, Xiaomeng
Desai, Bhushan
Duddalwar, Vinay
Matcuk, George R.
author_facet Fields, Brandon K. K.
Demirjian, Natalie L.
Cen, Steven Y.
Varghese, Bino A.
Hwang, Darryl H.
Lei, Xiaomeng
Desai, Bhushan
Duddalwar, Vinay
Matcuk, George R.
author_sort Fields, Brandon K. K.
collection PubMed
description OBJECTIVES: To evaluate the performance of machine learning–augmented MRI-based radiomics models for predicting response to neoadjuvant chemotherapy (NAC) in soft tissue sarcomas. METHODS: Forty-four subjects were identified retrospectively from patients who received NAC at our institution for pathologically proven soft tissue sarcomas. Only subjects who had both a baseline MRI prior to initiating chemotherapy and a post-treatment scan at least 2 months after initiating chemotherapy and prior to surgical resection were included. 3D ROIs were used to delineate whole-tumor volumes on pre- and post-treatment scans, from which 1708 radiomics features were extracted. Delta-radiomics features were calculated by subtraction of baseline from post-treatment values and used to distinguish treatment response through univariate analyses as well as machine learning–augmented radiomics analyses. RESULTS: Though only 4.74% of variables overall reached significance at p ≤ 0.05 in univariate analyses, Laws Texture Energy (LTE)-derived metrics represented 46.04% of all such features reaching statistical significance. ROC analyses similarly failed to predict NAC response, with AUCs of 0.40 (95% CI 0.22–0.58) and 0.44 (95% CI 0.26–0.62) for RF and AdaBoost, respectively. CONCLUSION: Overall, while our result was not able to separate NAC responders from non-responders, our analyses did identify a subset of LTE-derived metrics that show promise for further investigations. Future studies will likely benefit from larger sample size constructions so as to avoid the need for data filtering and feature selection techniques, which have the potential to significantly bias the machine learning procedures.
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spelling pubmed-103333972023-07-12 Predicting Soft Tissue Sarcoma Response to Neoadjuvant Chemotherapy Using an MRI-Based Delta-Radiomics Approach Fields, Brandon K. K. Demirjian, Natalie L. Cen, Steven Y. Varghese, Bino A. Hwang, Darryl H. Lei, Xiaomeng Desai, Bhushan Duddalwar, Vinay Matcuk, George R. Mol Imaging Biol Research Article OBJECTIVES: To evaluate the performance of machine learning–augmented MRI-based radiomics models for predicting response to neoadjuvant chemotherapy (NAC) in soft tissue sarcomas. METHODS: Forty-four subjects were identified retrospectively from patients who received NAC at our institution for pathologically proven soft tissue sarcomas. Only subjects who had both a baseline MRI prior to initiating chemotherapy and a post-treatment scan at least 2 months after initiating chemotherapy and prior to surgical resection were included. 3D ROIs were used to delineate whole-tumor volumes on pre- and post-treatment scans, from which 1708 radiomics features were extracted. Delta-radiomics features were calculated by subtraction of baseline from post-treatment values and used to distinguish treatment response through univariate analyses as well as machine learning–augmented radiomics analyses. RESULTS: Though only 4.74% of variables overall reached significance at p ≤ 0.05 in univariate analyses, Laws Texture Energy (LTE)-derived metrics represented 46.04% of all such features reaching statistical significance. ROC analyses similarly failed to predict NAC response, with AUCs of 0.40 (95% CI 0.22–0.58) and 0.44 (95% CI 0.26–0.62) for RF and AdaBoost, respectively. CONCLUSION: Overall, while our result was not able to separate NAC responders from non-responders, our analyses did identify a subset of LTE-derived metrics that show promise for further investigations. Future studies will likely benefit from larger sample size constructions so as to avoid the need for data filtering and feature selection techniques, which have the potential to significantly bias the machine learning procedures. Springer International Publishing 2023-01-25 2023 /pmc/articles/PMC10333397/ /pubmed/36695966 http://dx.doi.org/10.1007/s11307-023-01803-y Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Fields, Brandon K. K.
Demirjian, Natalie L.
Cen, Steven Y.
Varghese, Bino A.
Hwang, Darryl H.
Lei, Xiaomeng
Desai, Bhushan
Duddalwar, Vinay
Matcuk, George R.
Predicting Soft Tissue Sarcoma Response to Neoadjuvant Chemotherapy Using an MRI-Based Delta-Radiomics Approach
title Predicting Soft Tissue Sarcoma Response to Neoadjuvant Chemotherapy Using an MRI-Based Delta-Radiomics Approach
title_full Predicting Soft Tissue Sarcoma Response to Neoadjuvant Chemotherapy Using an MRI-Based Delta-Radiomics Approach
title_fullStr Predicting Soft Tissue Sarcoma Response to Neoadjuvant Chemotherapy Using an MRI-Based Delta-Radiomics Approach
title_full_unstemmed Predicting Soft Tissue Sarcoma Response to Neoadjuvant Chemotherapy Using an MRI-Based Delta-Radiomics Approach
title_short Predicting Soft Tissue Sarcoma Response to Neoadjuvant Chemotherapy Using an MRI-Based Delta-Radiomics Approach
title_sort predicting soft tissue sarcoma response to neoadjuvant chemotherapy using an mri-based delta-radiomics approach
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10333397/
https://www.ncbi.nlm.nih.gov/pubmed/36695966
http://dx.doi.org/10.1007/s11307-023-01803-y
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