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Phenotype Algorithms to Identify Hidradenitis Suppurativa Using Real-World Data: Development and Validation Study

BACKGROUND: Hidradenitis suppurativa (HS) is a potentially debilitating, chronic, recurring inflammatory disease. Observational databases provide opportunities to study the epidemiology of HS. OBJECTIVE: This study’s objective was to develop phenotype algorithms for HS suitable for epidemiological s...

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Autores principales: Hardin, Jill, Murray, Gayle, Swerdel, Joel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: JMIR Publications 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10334943/
https://www.ncbi.nlm.nih.gov/pubmed/37632892
http://dx.doi.org/10.2196/38783
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author Hardin, Jill
Murray, Gayle
Swerdel, Joel
author_facet Hardin, Jill
Murray, Gayle
Swerdel, Joel
author_sort Hardin, Jill
collection PubMed
description BACKGROUND: Hidradenitis suppurativa (HS) is a potentially debilitating, chronic, recurring inflammatory disease. Observational databases provide opportunities to study the epidemiology of HS. OBJECTIVE: This study’s objective was to develop phenotype algorithms for HS suitable for epidemiological studies based on a network of observational databases. METHODS: A data-driven approach was used to develop 4 HS algorithms. A literature search identified prior HS algorithms. Standardized databases from the Observational Medical Outcomes Partnership (n=9) were used to develop 2 incident and 2 prevalent HS phenotype algorithms. Two open-source diagnostic tools, CohortDiagnostics and PheValuator, were used to evaluate and generate phenotype performance metric estimates, including sensitivity, specificity, positive predictive value (PPV), and negative predictive value. RESULTS: We developed 2 prevalent and 2 incident HS algorithms. Validation showed that PPV estimates were highest (mean 86%) for the prevalent HS algorithm requiring at least two HS diagnosis codes. Sensitivity estimates were highest (mean 58%) for the prevalent HS algorithm requiring at least one HS code. CONCLUSIONS: This study illustrates the evaluation process and provides performance metrics for 2 incident and 2 prevalent HS algorithms across 9 observational databases. The use of a rigorous data-driven approach applied to a large number of databases provides confidence that the HS algorithms can correctly identify HS subjects.
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spelling pubmed-103349432023-07-18 Phenotype Algorithms to Identify Hidradenitis Suppurativa Using Real-World Data: Development and Validation Study Hardin, Jill Murray, Gayle Swerdel, Joel JMIR Dermatol Original Paper BACKGROUND: Hidradenitis suppurativa (HS) is a potentially debilitating, chronic, recurring inflammatory disease. Observational databases provide opportunities to study the epidemiology of HS. OBJECTIVE: This study’s objective was to develop phenotype algorithms for HS suitable for epidemiological studies based on a network of observational databases. METHODS: A data-driven approach was used to develop 4 HS algorithms. A literature search identified prior HS algorithms. Standardized databases from the Observational Medical Outcomes Partnership (n=9) were used to develop 2 incident and 2 prevalent HS phenotype algorithms. Two open-source diagnostic tools, CohortDiagnostics and PheValuator, were used to evaluate and generate phenotype performance metric estimates, including sensitivity, specificity, positive predictive value (PPV), and negative predictive value. RESULTS: We developed 2 prevalent and 2 incident HS algorithms. Validation showed that PPV estimates were highest (mean 86%) for the prevalent HS algorithm requiring at least two HS diagnosis codes. Sensitivity estimates were highest (mean 58%) for the prevalent HS algorithm requiring at least one HS code. CONCLUSIONS: This study illustrates the evaluation process and provides performance metrics for 2 incident and 2 prevalent HS algorithms across 9 observational databases. The use of a rigorous data-driven approach applied to a large number of databases provides confidence that the HS algorithms can correctly identify HS subjects. JMIR Publications 2022-11-30 /pmc/articles/PMC10334943/ /pubmed/37632892 http://dx.doi.org/10.2196/38783 Text en ©Jill Hardin, Gayle Murray, Joel Swerdel. Originally published in JMIR Dermatology (http://derma.jmir.org), 30.11.2022. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Dermatology, is properly cited. The complete bibliographic information, a link to the original publication on http://derma.jmir.org, as well as this copyright and license information must be included.
spellingShingle Original Paper
Hardin, Jill
Murray, Gayle
Swerdel, Joel
Phenotype Algorithms to Identify Hidradenitis Suppurativa Using Real-World Data: Development and Validation Study
title Phenotype Algorithms to Identify Hidradenitis Suppurativa Using Real-World Data: Development and Validation Study
title_full Phenotype Algorithms to Identify Hidradenitis Suppurativa Using Real-World Data: Development and Validation Study
title_fullStr Phenotype Algorithms to Identify Hidradenitis Suppurativa Using Real-World Data: Development and Validation Study
title_full_unstemmed Phenotype Algorithms to Identify Hidradenitis Suppurativa Using Real-World Data: Development and Validation Study
title_short Phenotype Algorithms to Identify Hidradenitis Suppurativa Using Real-World Data: Development and Validation Study
title_sort phenotype algorithms to identify hidradenitis suppurativa using real-world data: development and validation study
topic Original Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10334943/
https://www.ncbi.nlm.nih.gov/pubmed/37632892
http://dx.doi.org/10.2196/38783
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