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Association Between HTRA1, GAS6 and IFNGR2 Gene Polymorphisms and Stroke Susceptibility in the Chinese Han Population
BACKGROUND: Stroke has a high disability rate, and 30% of stroke cases have an unknown cause. Accurate diagnosis and treatment of stroke requires consideration of several rare heritable and non-heritable factors. OBJECTIVE: This study aimed to evaluate the impacts of three genetic polymorphisms (rs3...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Dove
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10335315/ https://www.ncbi.nlm.nih.gov/pubmed/37441189 http://dx.doi.org/10.2147/PGPM.S408911 |
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author | Zhang, Fan Peng, Hao Fu, Chuanyi Deng, Yidong Zhang, Mao Li, Wenan Zhong, Jian Zhou, Qing Huang, Li Xiao, Shuli Zhao, Jiannong |
author_facet | Zhang, Fan Peng, Hao Fu, Chuanyi Deng, Yidong Zhang, Mao Li, Wenan Zhong, Jian Zhou, Qing Huang, Li Xiao, Shuli Zhao, Jiannong |
author_sort | Zhang, Fan |
collection | PubMed |
description | BACKGROUND: Stroke has a high disability rate, and 30% of stroke cases have an unknown cause. Accurate diagnosis and treatment of stroke requires consideration of several rare heritable and non-heritable factors. OBJECTIVE: This study aimed to evaluate the impacts of three genetic polymorphisms (rs369149111 in HTRA1, rs1803628 in GAS6 and rs9808753 in IFNGR2) on stroke susceptibility among the Chinese Han population. METHODS: Three single nucleotide polymorphisms (SNPs) from 623 stroke cases and 572 healthy controls were genotyped by the Agena MassARRAY platform. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated by logistic regression analysis to evaluate the associations of three SNPs with stroke susceptibility. Additionally, SNP-SNP interactions were analyzed by multifactor dimensionality reduction (MDR). RESULTS: As demonstrated by the overall analysis, rs9808753 in IFNGR2 (allele: OR = 1.25, 95% CI = 1.06–1.47, p = 0.007; homozygous: OR = 1.59, 95% CI = 1.14–2.23, p = 0.007; dominant: OR = 1.31, 95% CI = 1.02–1.67, p = 0.032; recessive: OR = 1.42, 95% CI = 1.05–1.91, p = 0.022; additive: OR = 1.26, 95% CI = 1.07–1.48, p = 0.007) was associated with an increased susceptibility to stroke. Besides, stratification analysis suggested that rs9808753 was associated with an increased risk of stroke in subgroup aged ≤ 64 years, males and drinkers (p < 0.05). And rs1803628 in GAS6 was significantly associated with an increased susceptibility to stroke in non-smokers (p < 0.05). CONCLUSION: A risk-increasing effect of IFNGR2 rs980875 on stroke was detected in this study, which further broadens the understanding of the relationship between genetic polymorphisms and stroke susceptibility. |
format | Online Article Text |
id | pubmed-10335315 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Dove |
record_format | MEDLINE/PubMed |
spelling | pubmed-103353152023-07-12 Association Between HTRA1, GAS6 and IFNGR2 Gene Polymorphisms and Stroke Susceptibility in the Chinese Han Population Zhang, Fan Peng, Hao Fu, Chuanyi Deng, Yidong Zhang, Mao Li, Wenan Zhong, Jian Zhou, Qing Huang, Li Xiao, Shuli Zhao, Jiannong Pharmgenomics Pers Med Original Research BACKGROUND: Stroke has a high disability rate, and 30% of stroke cases have an unknown cause. Accurate diagnosis and treatment of stroke requires consideration of several rare heritable and non-heritable factors. OBJECTIVE: This study aimed to evaluate the impacts of three genetic polymorphisms (rs369149111 in HTRA1, rs1803628 in GAS6 and rs9808753 in IFNGR2) on stroke susceptibility among the Chinese Han population. METHODS: Three single nucleotide polymorphisms (SNPs) from 623 stroke cases and 572 healthy controls were genotyped by the Agena MassARRAY platform. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated by logistic regression analysis to evaluate the associations of three SNPs with stroke susceptibility. Additionally, SNP-SNP interactions were analyzed by multifactor dimensionality reduction (MDR). RESULTS: As demonstrated by the overall analysis, rs9808753 in IFNGR2 (allele: OR = 1.25, 95% CI = 1.06–1.47, p = 0.007; homozygous: OR = 1.59, 95% CI = 1.14–2.23, p = 0.007; dominant: OR = 1.31, 95% CI = 1.02–1.67, p = 0.032; recessive: OR = 1.42, 95% CI = 1.05–1.91, p = 0.022; additive: OR = 1.26, 95% CI = 1.07–1.48, p = 0.007) was associated with an increased susceptibility to stroke. Besides, stratification analysis suggested that rs9808753 was associated with an increased risk of stroke in subgroup aged ≤ 64 years, males and drinkers (p < 0.05). And rs1803628 in GAS6 was significantly associated with an increased susceptibility to stroke in non-smokers (p < 0.05). CONCLUSION: A risk-increasing effect of IFNGR2 rs980875 on stroke was detected in this study, which further broadens the understanding of the relationship between genetic polymorphisms and stroke susceptibility. Dove 2023-07-07 /pmc/articles/PMC10335315/ /pubmed/37441189 http://dx.doi.org/10.2147/PGPM.S408911 Text en © 2023 Zhang et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php). |
spellingShingle | Original Research Zhang, Fan Peng, Hao Fu, Chuanyi Deng, Yidong Zhang, Mao Li, Wenan Zhong, Jian Zhou, Qing Huang, Li Xiao, Shuli Zhao, Jiannong Association Between HTRA1, GAS6 and IFNGR2 Gene Polymorphisms and Stroke Susceptibility in the Chinese Han Population |
title | Association Between HTRA1, GAS6 and IFNGR2 Gene Polymorphisms and Stroke Susceptibility in the Chinese Han Population |
title_full | Association Between HTRA1, GAS6 and IFNGR2 Gene Polymorphisms and Stroke Susceptibility in the Chinese Han Population |
title_fullStr | Association Between HTRA1, GAS6 and IFNGR2 Gene Polymorphisms and Stroke Susceptibility in the Chinese Han Population |
title_full_unstemmed | Association Between HTRA1, GAS6 and IFNGR2 Gene Polymorphisms and Stroke Susceptibility in the Chinese Han Population |
title_short | Association Between HTRA1, GAS6 and IFNGR2 Gene Polymorphisms and Stroke Susceptibility in the Chinese Han Population |
title_sort | association between htra1, gas6 and ifngr2 gene polymorphisms and stroke susceptibility in the chinese han population |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10335315/ https://www.ncbi.nlm.nih.gov/pubmed/37441189 http://dx.doi.org/10.2147/PGPM.S408911 |
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