Cargando…

A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments — a Meta-analysis

Heavy metal (HM) accumulation in soil affects plants and soil fauna, yet the effect on microbial alpha-diversity remains unclear, mainly due to the absence of dedicated research synthesis (e.g. meta-analysis). Here, we report the first meta-analysis of the response of soil microbial alpha-diversity...

Descripción completa

Detalles Bibliográficos
Autores principales: Signorini, Marco, Midolo, Gabriele, Cesco, Stefano, Mimmo, Tanja, Borruso, Luigimaria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10335967/
https://www.ncbi.nlm.nih.gov/pubmed/36180621
http://dx.doi.org/10.1007/s00248-022-02115-4
_version_ 1785071108647550976
author Signorini, Marco
Midolo, Gabriele
Cesco, Stefano
Mimmo, Tanja
Borruso, Luigimaria
author_facet Signorini, Marco
Midolo, Gabriele
Cesco, Stefano
Mimmo, Tanja
Borruso, Luigimaria
author_sort Signorini, Marco
collection PubMed
description Heavy metal (HM) accumulation in soil affects plants and soil fauna, yet the effect on microbial alpha-diversity remains unclear, mainly due to the absence of dedicated research synthesis (e.g. meta-analysis). Here, we report the first meta-analysis of the response of soil microbial alpha-diversity to the experimental addition of cadmium (Cd) and copper (Cu). We considered studies conducted between 2013 and 2022 using DNA metabarcoding of bacterial and fungal communities to overcome limitations of other cultivation- and electrophoresis-based techniques. Fungi were discarded due to the limited study number (i.e. 6 studies). Bacterial studies resulted in 66 independent experiments reported in 32 primary papers from four continents. We found a negative dose-dependent response for Cu but not for Cd for bacterial alpha-diversity in the environments, only for Cu additions exceeding 29.6 mg kg(−1) (first loss of − 0.06% at 30 mg kg(−1)). The maximal loss of bacterial alpha-diversity registered was 13.89% at 3837 mg kg(−1). Our results first highlight that bacterial communities behave differently to soil pollution depending on the metal. Secondly, our study suggests that even extreme doses of Cu do not cause a dramatic loss in alpha-diversity, highlighting how the behaviour of bacterial communities diverges from soil macro-organisms. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00248-022-02115-4.
format Online
Article
Text
id pubmed-10335967
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Springer US
record_format MEDLINE/PubMed
spelling pubmed-103359672023-07-13 A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments — a Meta-analysis Signorini, Marco Midolo, Gabriele Cesco, Stefano Mimmo, Tanja Borruso, Luigimaria Microb Ecol Soil Microbiology Heavy metal (HM) accumulation in soil affects plants and soil fauna, yet the effect on microbial alpha-diversity remains unclear, mainly due to the absence of dedicated research synthesis (e.g. meta-analysis). Here, we report the first meta-analysis of the response of soil microbial alpha-diversity to the experimental addition of cadmium (Cd) and copper (Cu). We considered studies conducted between 2013 and 2022 using DNA metabarcoding of bacterial and fungal communities to overcome limitations of other cultivation- and electrophoresis-based techniques. Fungi were discarded due to the limited study number (i.e. 6 studies). Bacterial studies resulted in 66 independent experiments reported in 32 primary papers from four continents. We found a negative dose-dependent response for Cu but not for Cd for bacterial alpha-diversity in the environments, only for Cu additions exceeding 29.6 mg kg(−1) (first loss of − 0.06% at 30 mg kg(−1)). The maximal loss of bacterial alpha-diversity registered was 13.89% at 3837 mg kg(−1). Our results first highlight that bacterial communities behave differently to soil pollution depending on the metal. Secondly, our study suggests that even extreme doses of Cu do not cause a dramatic loss in alpha-diversity, highlighting how the behaviour of bacterial communities diverges from soil macro-organisms. GRAPHICAL ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00248-022-02115-4. Springer US 2022-09-30 2023 /pmc/articles/PMC10335967/ /pubmed/36180621 http://dx.doi.org/10.1007/s00248-022-02115-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Soil Microbiology
Signorini, Marco
Midolo, Gabriele
Cesco, Stefano
Mimmo, Tanja
Borruso, Luigimaria
A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments — a Meta-analysis
title A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments — a Meta-analysis
title_full A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments — a Meta-analysis
title_fullStr A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments — a Meta-analysis
title_full_unstemmed A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments — a Meta-analysis
title_short A Matter of Metals: Copper but Not Cadmium Affects the Microbial Alpha-Diversity of Soils and Sediments — a Meta-analysis
title_sort matter of metals: copper but not cadmium affects the microbial alpha-diversity of soils and sediments — a meta-analysis
topic Soil Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10335967/
https://www.ncbi.nlm.nih.gov/pubmed/36180621
http://dx.doi.org/10.1007/s00248-022-02115-4
work_keys_str_mv AT signorinimarco amatterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT midologabriele amatterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT cescostefano amatterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT mimmotanja amatterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT borrusoluigimaria amatterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT signorinimarco matterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT midologabriele matterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT cescostefano matterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT mimmotanja matterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis
AT borrusoluigimaria matterofmetalscopperbutnotcadmiumaffectsthemicrobialalphadiversityofsoilsandsedimentsametaanalysis