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DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus

Proteins with a catalytically inactive LytM-type endopeptidase domain are important regulators of cell wall-degrading enzymes in bacteria. Here, we study their representative DipM, a factor promoting cell division in Caulobacter crescentus. We show that the LytM domain of DipM interacts with multipl...

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Autores principales: Izquierdo-Martinez, Adrian, Billini, Maria, Miguel-Ruano, Vega, Hernández-Tamayo, Rogelio, Richter, Pia, Biboy, Jacob, Batuecas, María T., Glatter, Timo, Vollmer, Waldemar, Graumann, Peter L., Hermoso, Juan A., Thanbichler, Martin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10336132/
https://www.ncbi.nlm.nih.gov/pubmed/37433794
http://dx.doi.org/10.1038/s41467-023-39783-w
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author Izquierdo-Martinez, Adrian
Billini, Maria
Miguel-Ruano, Vega
Hernández-Tamayo, Rogelio
Richter, Pia
Biboy, Jacob
Batuecas, María T.
Glatter, Timo
Vollmer, Waldemar
Graumann, Peter L.
Hermoso, Juan A.
Thanbichler, Martin
author_facet Izquierdo-Martinez, Adrian
Billini, Maria
Miguel-Ruano, Vega
Hernández-Tamayo, Rogelio
Richter, Pia
Biboy, Jacob
Batuecas, María T.
Glatter, Timo
Vollmer, Waldemar
Graumann, Peter L.
Hermoso, Juan A.
Thanbichler, Martin
author_sort Izquierdo-Martinez, Adrian
collection PubMed
description Proteins with a catalytically inactive LytM-type endopeptidase domain are important regulators of cell wall-degrading enzymes in bacteria. Here, we study their representative DipM, a factor promoting cell division in Caulobacter crescentus. We show that the LytM domain of DipM interacts with multiple autolysins, including the soluble lytic transglycosylases SdpA and SdpB, the amidase AmiC and the putative carboxypeptidase CrbA, and stimulates the activities of SdpA and AmiC. Its crystal structure reveals a conserved groove, which is predicted to represent the docking site for autolysins by modeling studies. Mutations in this groove indeed abolish the function of DipM in vivo and its interaction with AmiC and SdpA in vitro. Notably, DipM and its targets SdpA and SdpB stimulate each other’s recruitment to midcell, establishing a self-reinforcing cycle that gradually increases autolytic activity as cytokinesis progresses. DipM thus coordinates different peptidoglycan-remodeling pathways to ensure proper cell constriction and daughter cell separation.
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spelling pubmed-103361322023-07-13 DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus Izquierdo-Martinez, Adrian Billini, Maria Miguel-Ruano, Vega Hernández-Tamayo, Rogelio Richter, Pia Biboy, Jacob Batuecas, María T. Glatter, Timo Vollmer, Waldemar Graumann, Peter L. Hermoso, Juan A. Thanbichler, Martin Nat Commun Article Proteins with a catalytically inactive LytM-type endopeptidase domain are important regulators of cell wall-degrading enzymes in bacteria. Here, we study their representative DipM, a factor promoting cell division in Caulobacter crescentus. We show that the LytM domain of DipM interacts with multiple autolysins, including the soluble lytic transglycosylases SdpA and SdpB, the amidase AmiC and the putative carboxypeptidase CrbA, and stimulates the activities of SdpA and AmiC. Its crystal structure reveals a conserved groove, which is predicted to represent the docking site for autolysins by modeling studies. Mutations in this groove indeed abolish the function of DipM in vivo and its interaction with AmiC and SdpA in vitro. Notably, DipM and its targets SdpA and SdpB stimulate each other’s recruitment to midcell, establishing a self-reinforcing cycle that gradually increases autolytic activity as cytokinesis progresses. DipM thus coordinates different peptidoglycan-remodeling pathways to ensure proper cell constriction and daughter cell separation. Nature Publishing Group UK 2023-07-11 /pmc/articles/PMC10336132/ /pubmed/37433794 http://dx.doi.org/10.1038/s41467-023-39783-w Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Izquierdo-Martinez, Adrian
Billini, Maria
Miguel-Ruano, Vega
Hernández-Tamayo, Rogelio
Richter, Pia
Biboy, Jacob
Batuecas, María T.
Glatter, Timo
Vollmer, Waldemar
Graumann, Peter L.
Hermoso, Juan A.
Thanbichler, Martin
DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus
title DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus
title_full DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus
title_fullStr DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus
title_full_unstemmed DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus
title_short DipM controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in Caulobacter crescentus
title_sort dipm controls multiple autolysins and mediates a regulatory feedback loop promoting cell constriction in caulobacter crescentus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10336132/
https://www.ncbi.nlm.nih.gov/pubmed/37433794
http://dx.doi.org/10.1038/s41467-023-39783-w
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