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Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy
PURPOSE: To develop and train a deep learning-based algorithm for detecting disorganization of retinal inner layers (DRIL) on optical coherence tomography (OCT) to screen a cohort of patients with diabetic retinopathy (DR). METHODS: In this cross-sectional study, subjects over age 18, with ICD-9/10...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10337787/ https://www.ncbi.nlm.nih.gov/pubmed/37410472 http://dx.doi.org/10.1167/tvst.12.7.6 |
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author | Singh, Rupesh Singuri, Srinidhi Batoki, Julia Lin, Kimberly Luo, Shiming Hatipoglu, Dilara Anand-Apte, Bela Yuan, Alex |
author_facet | Singh, Rupesh Singuri, Srinidhi Batoki, Julia Lin, Kimberly Luo, Shiming Hatipoglu, Dilara Anand-Apte, Bela Yuan, Alex |
author_sort | Singh, Rupesh |
collection | PubMed |
description | PURPOSE: To develop and train a deep learning-based algorithm for detecting disorganization of retinal inner layers (DRIL) on optical coherence tomography (OCT) to screen a cohort of patients with diabetic retinopathy (DR). METHODS: In this cross-sectional study, subjects over age 18, with ICD-9/10 diagnoses of type 2 diabetes with and without retinopathy and Cirrus HD-OCT imaging performed between January 2009 to September 2019 were included in this study. After inclusion and exclusion criteria were applied, a final total of 664 patients (5992 B-scans from 1201 eyes) were included for analysis. Five-line horizontal raster scans from Cirrus HD-OCT were obtained from the shared electronic health record. Two trained graders evaluated scans for presence of DRIL. A third physician grader arbitrated any disagreements. Of 5992 B-scans analyzed, 1397 scans (∼30%) demonstrated presence of DRIL. Graded scans were used to label training data for the convolution neural network (CNN) development and training. RESULTS: On a single CPU system, the best performing CNN training took ∼35 mins. Labeled data were divided 90:10 for internal training/validation and external testing purpose. With this training, our deep learning network was able to predict the presence of DRIL in new OCT scans with a high accuracy of 88.3%, specificity of 90.0%, sensitivity of 82.9%, and Matthews correlation coefficient of 0.7. CONCLUSIONS: The present study demonstrates that a deep learning-based OCT classification algorithm can be used for rapid automated identification of DRIL. This developed tool can assist in screening for DRIL in both research and clinical decision-making settings. TRANSLATIONAL RELEVANCE: A deep learning algorithm can detect disorganization of retinal inner layers in OCT scans. |
format | Online Article Text |
id | pubmed-10337787 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-103377872023-07-13 Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy Singh, Rupesh Singuri, Srinidhi Batoki, Julia Lin, Kimberly Luo, Shiming Hatipoglu, Dilara Anand-Apte, Bela Yuan, Alex Transl Vis Sci Technol Artificial Intelligence PURPOSE: To develop and train a deep learning-based algorithm for detecting disorganization of retinal inner layers (DRIL) on optical coherence tomography (OCT) to screen a cohort of patients with diabetic retinopathy (DR). METHODS: In this cross-sectional study, subjects over age 18, with ICD-9/10 diagnoses of type 2 diabetes with and without retinopathy and Cirrus HD-OCT imaging performed between January 2009 to September 2019 were included in this study. After inclusion and exclusion criteria were applied, a final total of 664 patients (5992 B-scans from 1201 eyes) were included for analysis. Five-line horizontal raster scans from Cirrus HD-OCT were obtained from the shared electronic health record. Two trained graders evaluated scans for presence of DRIL. A third physician grader arbitrated any disagreements. Of 5992 B-scans analyzed, 1397 scans (∼30%) demonstrated presence of DRIL. Graded scans were used to label training data for the convolution neural network (CNN) development and training. RESULTS: On a single CPU system, the best performing CNN training took ∼35 mins. Labeled data were divided 90:10 for internal training/validation and external testing purpose. With this training, our deep learning network was able to predict the presence of DRIL in new OCT scans with a high accuracy of 88.3%, specificity of 90.0%, sensitivity of 82.9%, and Matthews correlation coefficient of 0.7. CONCLUSIONS: The present study demonstrates that a deep learning-based OCT classification algorithm can be used for rapid automated identification of DRIL. This developed tool can assist in screening for DRIL in both research and clinical decision-making settings. TRANSLATIONAL RELEVANCE: A deep learning algorithm can detect disorganization of retinal inner layers in OCT scans. The Association for Research in Vision and Ophthalmology 2023-07-06 /pmc/articles/PMC10337787/ /pubmed/37410472 http://dx.doi.org/10.1167/tvst.12.7.6 Text en Copyright 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Artificial Intelligence Singh, Rupesh Singuri, Srinidhi Batoki, Julia Lin, Kimberly Luo, Shiming Hatipoglu, Dilara Anand-Apte, Bela Yuan, Alex Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy |
title | Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy |
title_full | Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy |
title_fullStr | Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy |
title_full_unstemmed | Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy |
title_short | Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy |
title_sort | deep learning algorithm detects presence of disorganization of retinal inner layers (dril)–an early imaging biomarker in diabetic retinopathy |
topic | Artificial Intelligence |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10337787/ https://www.ncbi.nlm.nih.gov/pubmed/37410472 http://dx.doi.org/10.1167/tvst.12.7.6 |
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