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Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy

PURPOSE: To develop and train a deep learning-based algorithm for detecting disorganization of retinal inner layers (DRIL) on optical coherence tomography (OCT) to screen a cohort of patients with diabetic retinopathy (DR). METHODS: In this cross-sectional study, subjects over age 18, with ICD-9/10...

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Autores principales: Singh, Rupesh, Singuri, Srinidhi, Batoki, Julia, Lin, Kimberly, Luo, Shiming, Hatipoglu, Dilara, Anand-Apte, Bela, Yuan, Alex
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Association for Research in Vision and Ophthalmology 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10337787/
https://www.ncbi.nlm.nih.gov/pubmed/37410472
http://dx.doi.org/10.1167/tvst.12.7.6
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author Singh, Rupesh
Singuri, Srinidhi
Batoki, Julia
Lin, Kimberly
Luo, Shiming
Hatipoglu, Dilara
Anand-Apte, Bela
Yuan, Alex
author_facet Singh, Rupesh
Singuri, Srinidhi
Batoki, Julia
Lin, Kimberly
Luo, Shiming
Hatipoglu, Dilara
Anand-Apte, Bela
Yuan, Alex
author_sort Singh, Rupesh
collection PubMed
description PURPOSE: To develop and train a deep learning-based algorithm for detecting disorganization of retinal inner layers (DRIL) on optical coherence tomography (OCT) to screen a cohort of patients with diabetic retinopathy (DR). METHODS: In this cross-sectional study, subjects over age 18, with ICD-9/10 diagnoses of type 2 diabetes with and without retinopathy and Cirrus HD-OCT imaging performed between January 2009 to September 2019 were included in this study. After inclusion and exclusion criteria were applied, a final total of 664 patients (5992 B-scans from 1201 eyes) were included for analysis. Five-line horizontal raster scans from Cirrus HD-OCT were obtained from the shared electronic health record. Two trained graders evaluated scans for presence of DRIL. A third physician grader arbitrated any disagreements. Of 5992 B-scans analyzed, 1397 scans (∼30%) demonstrated presence of DRIL. Graded scans were used to label training data for the convolution neural network (CNN) development and training. RESULTS: On a single CPU system, the best performing CNN training took ∼35 mins. Labeled data were divided 90:10 for internal training/validation and external testing purpose. With this training, our deep learning network was able to predict the presence of DRIL in new OCT scans with a high accuracy of 88.3%, specificity of 90.0%, sensitivity of 82.9%, and Matthews correlation coefficient of 0.7. CONCLUSIONS: The present study demonstrates that a deep learning-based OCT classification algorithm can be used for rapid automated identification of DRIL. This developed tool can assist in screening for DRIL in both research and clinical decision-making settings. TRANSLATIONAL RELEVANCE: A deep learning algorithm can detect disorganization of retinal inner layers in OCT scans.
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spelling pubmed-103377872023-07-13 Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy Singh, Rupesh Singuri, Srinidhi Batoki, Julia Lin, Kimberly Luo, Shiming Hatipoglu, Dilara Anand-Apte, Bela Yuan, Alex Transl Vis Sci Technol Artificial Intelligence PURPOSE: To develop and train a deep learning-based algorithm for detecting disorganization of retinal inner layers (DRIL) on optical coherence tomography (OCT) to screen a cohort of patients with diabetic retinopathy (DR). METHODS: In this cross-sectional study, subjects over age 18, with ICD-9/10 diagnoses of type 2 diabetes with and without retinopathy and Cirrus HD-OCT imaging performed between January 2009 to September 2019 were included in this study. After inclusion and exclusion criteria were applied, a final total of 664 patients (5992 B-scans from 1201 eyes) were included for analysis. Five-line horizontal raster scans from Cirrus HD-OCT were obtained from the shared electronic health record. Two trained graders evaluated scans for presence of DRIL. A third physician grader arbitrated any disagreements. Of 5992 B-scans analyzed, 1397 scans (∼30%) demonstrated presence of DRIL. Graded scans were used to label training data for the convolution neural network (CNN) development and training. RESULTS: On a single CPU system, the best performing CNN training took ∼35 mins. Labeled data were divided 90:10 for internal training/validation and external testing purpose. With this training, our deep learning network was able to predict the presence of DRIL in new OCT scans with a high accuracy of 88.3%, specificity of 90.0%, sensitivity of 82.9%, and Matthews correlation coefficient of 0.7. CONCLUSIONS: The present study demonstrates that a deep learning-based OCT classification algorithm can be used for rapid automated identification of DRIL. This developed tool can assist in screening for DRIL in both research and clinical decision-making settings. TRANSLATIONAL RELEVANCE: A deep learning algorithm can detect disorganization of retinal inner layers in OCT scans. The Association for Research in Vision and Ophthalmology 2023-07-06 /pmc/articles/PMC10337787/ /pubmed/37410472 http://dx.doi.org/10.1167/tvst.12.7.6 Text en Copyright 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
spellingShingle Artificial Intelligence
Singh, Rupesh
Singuri, Srinidhi
Batoki, Julia
Lin, Kimberly
Luo, Shiming
Hatipoglu, Dilara
Anand-Apte, Bela
Yuan, Alex
Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy
title Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy
title_full Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy
title_fullStr Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy
title_full_unstemmed Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy
title_short Deep Learning Algorithm Detects Presence of Disorganization of Retinal Inner Layers (DRIL)–An Early Imaging Biomarker in Diabetic Retinopathy
title_sort deep learning algorithm detects presence of disorganization of retinal inner layers (dril)–an early imaging biomarker in diabetic retinopathy
topic Artificial Intelligence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10337787/
https://www.ncbi.nlm.nih.gov/pubmed/37410472
http://dx.doi.org/10.1167/tvst.12.7.6
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