Cargando…

AI-designed NMR spectroscopy RF pulses for fast acquisition at high and ultra-high magnetic fields

Nuclear magnetic resonance (NMR) spectroscopy is a powerful high-resolution tool for characterizing biomacromolecular structure, dynamics, and interactions. However, the lengthy longitudinal relaxation of the nuclear spins significantly extends the total experimental time, especially at high and ult...

Descripción completa

Detalles Bibliográficos
Autores principales: Manu, V. S., Olivieri, Cristina, Veglia, Gianluigi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338431/
https://www.ncbi.nlm.nih.gov/pubmed/37438347
http://dx.doi.org/10.1038/s41467-023-39581-4
_version_ 1785071625455009792
author Manu, V. S.
Olivieri, Cristina
Veglia, Gianluigi
author_facet Manu, V. S.
Olivieri, Cristina
Veglia, Gianluigi
author_sort Manu, V. S.
collection PubMed
description Nuclear magnetic resonance (NMR) spectroscopy is a powerful high-resolution tool for characterizing biomacromolecular structure, dynamics, and interactions. However, the lengthy longitudinal relaxation of the nuclear spins significantly extends the total experimental time, especially at high and ultra-high magnetic field strengths. Although longitudinal relaxation-enhanced techniques have sped up data acquisition, their application has been limited by the chemical shift dispersion. Here we combined an evolutionary algorithm and artificial intelligence to design (1)H and (15)N radio frequency (RF) pulses with variable phase and amplitude that cover significantly broader bandwidths and allow for rapid data acquisition. We re-engineered the basic transverse relaxation optimized spectroscopy experiment and showed that the RF shapes enhance the spectral sensitivity of well-folded proteins up to 180 kDa molecular weight. These RF shapes can be tailored to re-design triple-resonance experiments for accelerating NMR spectroscopy of biomacromolecules at high fields.
format Online
Article
Text
id pubmed-10338431
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-103384312023-07-14 AI-designed NMR spectroscopy RF pulses for fast acquisition at high and ultra-high magnetic fields Manu, V. S. Olivieri, Cristina Veglia, Gianluigi Nat Commun Article Nuclear magnetic resonance (NMR) spectroscopy is a powerful high-resolution tool for characterizing biomacromolecular structure, dynamics, and interactions. However, the lengthy longitudinal relaxation of the nuclear spins significantly extends the total experimental time, especially at high and ultra-high magnetic field strengths. Although longitudinal relaxation-enhanced techniques have sped up data acquisition, their application has been limited by the chemical shift dispersion. Here we combined an evolutionary algorithm and artificial intelligence to design (1)H and (15)N radio frequency (RF) pulses with variable phase and amplitude that cover significantly broader bandwidths and allow for rapid data acquisition. We re-engineered the basic transverse relaxation optimized spectroscopy experiment and showed that the RF shapes enhance the spectral sensitivity of well-folded proteins up to 180 kDa molecular weight. These RF shapes can be tailored to re-design triple-resonance experiments for accelerating NMR spectroscopy of biomacromolecules at high fields. Nature Publishing Group UK 2023-07-12 /pmc/articles/PMC10338431/ /pubmed/37438347 http://dx.doi.org/10.1038/s41467-023-39581-4 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Manu, V. S.
Olivieri, Cristina
Veglia, Gianluigi
AI-designed NMR spectroscopy RF pulses for fast acquisition at high and ultra-high magnetic fields
title AI-designed NMR spectroscopy RF pulses for fast acquisition at high and ultra-high magnetic fields
title_full AI-designed NMR spectroscopy RF pulses for fast acquisition at high and ultra-high magnetic fields
title_fullStr AI-designed NMR spectroscopy RF pulses for fast acquisition at high and ultra-high magnetic fields
title_full_unstemmed AI-designed NMR spectroscopy RF pulses for fast acquisition at high and ultra-high magnetic fields
title_short AI-designed NMR spectroscopy RF pulses for fast acquisition at high and ultra-high magnetic fields
title_sort ai-designed nmr spectroscopy rf pulses for fast acquisition at high and ultra-high magnetic fields
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338431/
https://www.ncbi.nlm.nih.gov/pubmed/37438347
http://dx.doi.org/10.1038/s41467-023-39581-4
work_keys_str_mv AT manuvs aidesignednmrspectroscopyrfpulsesforfastacquisitionathighandultrahighmagneticfields
AT oliviericristina aidesignednmrspectroscopyrfpulsesforfastacquisitionathighandultrahighmagneticfields
AT vegliagianluigi aidesignednmrspectroscopyrfpulsesforfastacquisitionathighandultrahighmagneticfields