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Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it

INTRODUCTION: Indocyanine green (ICG) quantification and assessment by machine learning (ML) could discriminate tissue types through perfusion characterisation, including delineation of malignancy. Here, we detail the important challenges overcome before effective clinical validation of such capabil...

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Autores principales: Hardy, Niall P., MacAonghusa, Pol, Dalli, Jeffrey, Gallagher, Gareth, Epperlein, Jonathan P., Shields, Conor, Mulsow, Jurgen, Rogers, Ailín C., Brannigan, Ann E., Conneely, John B., Neary, Peter M., Cahill, Ronan A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338552/
https://www.ncbi.nlm.nih.gov/pubmed/36894810
http://dx.doi.org/10.1007/s00464-023-09963-2
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author Hardy, Niall P.
MacAonghusa, Pol
Dalli, Jeffrey
Gallagher, Gareth
Epperlein, Jonathan P.
Shields, Conor
Mulsow, Jurgen
Rogers, Ailín C.
Brannigan, Ann E.
Conneely, John B.
Neary, Peter M.
Cahill, Ronan A.
author_facet Hardy, Niall P.
MacAonghusa, Pol
Dalli, Jeffrey
Gallagher, Gareth
Epperlein, Jonathan P.
Shields, Conor
Mulsow, Jurgen
Rogers, Ailín C.
Brannigan, Ann E.
Conneely, John B.
Neary, Peter M.
Cahill, Ronan A.
author_sort Hardy, Niall P.
collection PubMed
description INTRODUCTION: Indocyanine green (ICG) quantification and assessment by machine learning (ML) could discriminate tissue types through perfusion characterisation, including delineation of malignancy. Here, we detail the important challenges overcome before effective clinical validation of such capability in a prospective patient series of quantitative fluorescence angiograms regarding primary and secondary colorectal neoplasia. METHODS: ICG perfusion videos from 50 patients (37 with benign (13) and malignant (24) rectal tumours and 13 with colorectal liver metastases) of between 2- and 15-min duration following intravenously administered ICG were formally studied (clinicaltrials.gov: NCT04220242). Video quality with respect to interpretative ML reliability was studied observing practical, technical and technological aspects of fluorescence signal acquisition. Investigated parameters included ICG dosing and administration, distance–intensity fluorescent signal variation, tissue and camera movement (including real-time camera tracking) as well as sampling issues with user-selected digital tissue biopsy. Attenuating strategies for the identified problems were developed, applied and evaluated. ML methods to classify extracted data, including datasets with interrupted time-series lengths with inference simulated data were also evaluated. RESULTS: Definable, remediable challenges arose across both rectal and liver cohorts. Varying ICG dose by tissue type was identified as an important feature of real-time fluorescence quantification. Multi-region sampling within a lesion mitigated representation issues whilst distance–intensity relationships, as well as movement-instability issues, were demonstrated and ameliorated with post-processing techniques including normalisation and smoothing of extracted time–fluorescence curves. ML methods (automated feature extraction and classification) enabled ML algorithms glean excellent pathological categorisation results (AUC-ROC > 0.9, 37 rectal lesions) with imputation proving a robust method of compensation for interrupted time-series data with duration discrepancies. CONCLUSION: Purposeful clinical and data-processing protocols enable powerful pathological characterisation with existing clinical systems. Video analysis as shown can inform iterative and definitive clinical validation studies on how to close the translation gap between research applications and real-world, real-time clinical utility. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00464-023-09963-2.
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spelling pubmed-103385522023-07-14 Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it Hardy, Niall P. MacAonghusa, Pol Dalli, Jeffrey Gallagher, Gareth Epperlein, Jonathan P. Shields, Conor Mulsow, Jurgen Rogers, Ailín C. Brannigan, Ann E. Conneely, John B. Neary, Peter M. Cahill, Ronan A. Surg Endosc 2022 SAGES Oral INTRODUCTION: Indocyanine green (ICG) quantification and assessment by machine learning (ML) could discriminate tissue types through perfusion characterisation, including delineation of malignancy. Here, we detail the important challenges overcome before effective clinical validation of such capability in a prospective patient series of quantitative fluorescence angiograms regarding primary and secondary colorectal neoplasia. METHODS: ICG perfusion videos from 50 patients (37 with benign (13) and malignant (24) rectal tumours and 13 with colorectal liver metastases) of between 2- and 15-min duration following intravenously administered ICG were formally studied (clinicaltrials.gov: NCT04220242). Video quality with respect to interpretative ML reliability was studied observing practical, technical and technological aspects of fluorescence signal acquisition. Investigated parameters included ICG dosing and administration, distance–intensity fluorescent signal variation, tissue and camera movement (including real-time camera tracking) as well as sampling issues with user-selected digital tissue biopsy. Attenuating strategies for the identified problems were developed, applied and evaluated. ML methods to classify extracted data, including datasets with interrupted time-series lengths with inference simulated data were also evaluated. RESULTS: Definable, remediable challenges arose across both rectal and liver cohorts. Varying ICG dose by tissue type was identified as an important feature of real-time fluorescence quantification. Multi-region sampling within a lesion mitigated representation issues whilst distance–intensity relationships, as well as movement-instability issues, were demonstrated and ameliorated with post-processing techniques including normalisation and smoothing of extracted time–fluorescence curves. ML methods (automated feature extraction and classification) enabled ML algorithms glean excellent pathological categorisation results (AUC-ROC > 0.9, 37 rectal lesions) with imputation proving a robust method of compensation for interrupted time-series data with duration discrepancies. CONCLUSION: Purposeful clinical and data-processing protocols enable powerful pathological characterisation with existing clinical systems. Video analysis as shown can inform iterative and definitive clinical validation studies on how to close the translation gap between research applications and real-world, real-time clinical utility. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00464-023-09963-2. Springer US 2023-03-09 2023 /pmc/articles/PMC10338552/ /pubmed/36894810 http://dx.doi.org/10.1007/s00464-023-09963-2 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle 2022 SAGES Oral
Hardy, Niall P.
MacAonghusa, Pol
Dalli, Jeffrey
Gallagher, Gareth
Epperlein, Jonathan P.
Shields, Conor
Mulsow, Jurgen
Rogers, Ailín C.
Brannigan, Ann E.
Conneely, John B.
Neary, Peter M.
Cahill, Ronan A.
Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it
title Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it
title_full Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it
title_fullStr Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it
title_full_unstemmed Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it
title_short Clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it
title_sort clinical application of machine learning and computer vision to indocyanine green quantification for dynamic intraoperative tissue characterisation: how to do it
topic 2022 SAGES Oral
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338552/
https://www.ncbi.nlm.nih.gov/pubmed/36894810
http://dx.doi.org/10.1007/s00464-023-09963-2
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