Cargando…
Individual tree segmentation of airborne and UAV LiDAR point clouds based on the watershed and optimized connection center evolution clustering
Light detection and ranging (LiDAR) data can provide 3D structural information of objects and are ideal for extracting individual tree parameters, and individual tree segmentation (ITS) is a vital step for this purpose. Various ITS methods have been emerging from airborne LiDAR scanning (ALS) or unm...
Autores principales: | , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338759/ https://www.ncbi.nlm.nih.gov/pubmed/37456074 http://dx.doi.org/10.1002/ece3.10297 |
_version_ | 1785071695217819648 |
---|---|
author | Li, Yi Xie, Donghui Wang, Yingjie Jin, Shuangna Zhou, Kun Zhang, Zhixiang Li, Weihua Zhang, Wuming Mu, Xihan Yan, Guangjian |
author_facet | Li, Yi Xie, Donghui Wang, Yingjie Jin, Shuangna Zhou, Kun Zhang, Zhixiang Li, Weihua Zhang, Wuming Mu, Xihan Yan, Guangjian |
author_sort | Li, Yi |
collection | PubMed |
description | Light detection and ranging (LiDAR) data can provide 3D structural information of objects and are ideal for extracting individual tree parameters, and individual tree segmentation (ITS) is a vital step for this purpose. Various ITS methods have been emerging from airborne LiDAR scanning (ALS) or unmanned aerial vehicle LiDAR scanning (ULS) data. Here, we propose a new individual tree segmentation method, which couples the classical and efficient watershed algorithm (WS) and the newly developed connection center evolution (CCE) clustering algorithm in pattern recognition. The CCE is first used in ITS and comprehensively optimized by considering tree structure and point cloud characteristics. Firstly, the amount of data is greatly reduced by mean shift voxelization. Then, the optimal clustering scale is automatically determined by the shapes in the projection of three different directions. We select five forest plots in Saihanba, China and 14 public plots in Alpine region, Europe with ULS or ALS point cloud densities from 11 to 3295 pts/m(2). Eleven ITS methods were used for comparison. The accuracy of tree top detection and tree height extraction is estimated by five and two metrics, respectively. The results show that the matching rate (R (match)) of tree tops is up to 0.92, the coefficient of determination (R (2)) of tree height estimation is up to .94, and the minimum root mean square error (RMSE) is 0.6 m. Our method outperforms the other methods especially in the broadleaf forests plot on slopes, where the five evaluation metrics for tree top detection outperformed the other algorithms by at least 11% on average. Our ITS method is both robust and efficient and has the potential to be used especially in coniferous forests to extract the structural parameters of individual trees for forest management, carbon stock estimation, and habitat mapping. |
format | Online Article Text |
id | pubmed-10338759 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103387592023-07-14 Individual tree segmentation of airborne and UAV LiDAR point clouds based on the watershed and optimized connection center evolution clustering Li, Yi Xie, Donghui Wang, Yingjie Jin, Shuangna Zhou, Kun Zhang, Zhixiang Li, Weihua Zhang, Wuming Mu, Xihan Yan, Guangjian Ecol Evol Research Articles Light detection and ranging (LiDAR) data can provide 3D structural information of objects and are ideal for extracting individual tree parameters, and individual tree segmentation (ITS) is a vital step for this purpose. Various ITS methods have been emerging from airborne LiDAR scanning (ALS) or unmanned aerial vehicle LiDAR scanning (ULS) data. Here, we propose a new individual tree segmentation method, which couples the classical and efficient watershed algorithm (WS) and the newly developed connection center evolution (CCE) clustering algorithm in pattern recognition. The CCE is first used in ITS and comprehensively optimized by considering tree structure and point cloud characteristics. Firstly, the amount of data is greatly reduced by mean shift voxelization. Then, the optimal clustering scale is automatically determined by the shapes in the projection of three different directions. We select five forest plots in Saihanba, China and 14 public plots in Alpine region, Europe with ULS or ALS point cloud densities from 11 to 3295 pts/m(2). Eleven ITS methods were used for comparison. The accuracy of tree top detection and tree height extraction is estimated by five and two metrics, respectively. The results show that the matching rate (R (match)) of tree tops is up to 0.92, the coefficient of determination (R (2)) of tree height estimation is up to .94, and the minimum root mean square error (RMSE) is 0.6 m. Our method outperforms the other methods especially in the broadleaf forests plot on slopes, where the five evaluation metrics for tree top detection outperformed the other algorithms by at least 11% on average. Our ITS method is both robust and efficient and has the potential to be used especially in coniferous forests to extract the structural parameters of individual trees for forest management, carbon stock estimation, and habitat mapping. John Wiley and Sons Inc. 2023-07-12 /pmc/articles/PMC10338759/ /pubmed/37456074 http://dx.doi.org/10.1002/ece3.10297 Text en © 2023 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Li, Yi Xie, Donghui Wang, Yingjie Jin, Shuangna Zhou, Kun Zhang, Zhixiang Li, Weihua Zhang, Wuming Mu, Xihan Yan, Guangjian Individual tree segmentation of airborne and UAV LiDAR point clouds based on the watershed and optimized connection center evolution clustering |
title | Individual tree segmentation of airborne and UAV LiDAR point clouds based on the watershed and optimized connection center evolution clustering |
title_full | Individual tree segmentation of airborne and UAV LiDAR point clouds based on the watershed and optimized connection center evolution clustering |
title_fullStr | Individual tree segmentation of airborne and UAV LiDAR point clouds based on the watershed and optimized connection center evolution clustering |
title_full_unstemmed | Individual tree segmentation of airborne and UAV LiDAR point clouds based on the watershed and optimized connection center evolution clustering |
title_short | Individual tree segmentation of airborne and UAV LiDAR point clouds based on the watershed and optimized connection center evolution clustering |
title_sort | individual tree segmentation of airborne and uav lidar point clouds based on the watershed and optimized connection center evolution clustering |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338759/ https://www.ncbi.nlm.nih.gov/pubmed/37456074 http://dx.doi.org/10.1002/ece3.10297 |
work_keys_str_mv | AT liyi individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT xiedonghui individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT wangyingjie individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT jinshuangna individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT zhoukun individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT zhangzhixiang individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT liweihua individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT zhangwuming individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT muxihan individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering AT yanguangjian individualtreesegmentationofairborneanduavlidarpointcloudsbasedonthewatershedandoptimizedconnectioncenterevolutionclustering |