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Resection cavity auto‐contouring for patients with pediatric medulloblastoma using only CT information
PURPOSE: Target delineation for radiation therapy is a time‐consuming and complex task. Autocontouring gross tumor volumes (GTVs) has been shown to increase efficiency. However, there is limited literature on post‐operative target delineation, particularly for CT‐based studies. To this end, we train...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338760/ https://www.ncbi.nlm.nih.gov/pubmed/36917640 http://dx.doi.org/10.1002/acm2.13956 |
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author | Hernandez, Soleil Nguyen, Callistus Gay, Skylar Duryea, Jack Howell, Rebecca Fuentes, David Parkes, Jeannette Burger, Hester Cardenas, Carlos Paulino, Arnold C. Pollard‐Larkin, Julianne Court, Laurence |
author_facet | Hernandez, Soleil Nguyen, Callistus Gay, Skylar Duryea, Jack Howell, Rebecca Fuentes, David Parkes, Jeannette Burger, Hester Cardenas, Carlos Paulino, Arnold C. Pollard‐Larkin, Julianne Court, Laurence |
author_sort | Hernandez, Soleil |
collection | PubMed |
description | PURPOSE: Target delineation for radiation therapy is a time‐consuming and complex task. Autocontouring gross tumor volumes (GTVs) has been shown to increase efficiency. However, there is limited literature on post‐operative target delineation, particularly for CT‐based studies. To this end, we trained a CT‐based autocontouring model to contour the post‐operative GTV of pediatric patients with medulloblastoma. METHODS: One hundred four retrospective pediatric CT scans were used to train a GTV auto‐contouring model. Eighty patients were then preselected for contour visibility, continuity, and location to train an additional model. Each GTV was manually annotated with a visibility score based on the number of slices with a visible GTV (1 = < 25%, 2 = 25–50%, 3 = > 50–75%, and 4 = > 75–100%). Contrast and the contrast‐to‐noise ratio (CNR) were calculated for the GTV contour with respect to a cropped background image. Both models were tested on the original and pre‐selected testing sets. The resulting surface and overlap metrics were calculated comparing the clinical and autocontoured GTVs and the corresponding clinical target volumes (CTVs). RESULTS: Eighty patients were pre‐selected to have a continuous GTV within the posterior fossa. Of these, 7, 41, 21, and 11 were visibly scored as 4, 3, 2, and 1, respectively. The contrast and CNR removed an additional 11 and 20 patients from the dataset, respectively. The Dice similarity coefficients (DSC) were 0.61 ± 0.29 and 0.67 ± 0.22 on the models without pre‐selected training data and 0.55 ± 13.01 and 0.83 ± 0.17 on the models with pre‐selected data, respectively. The DSC on the CTV expansions were 0.90 ± 0.13. CONCLUSION: We successfully automatically contoured continuous GTVs within the posterior fossa on scans that had contrast > ± 10 HU. CT‐Based auto‐contouring algorithms have potential to positively impact centers with limited MRI access. |
format | Online Article Text |
id | pubmed-10338760 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103387602023-07-14 Resection cavity auto‐contouring for patients with pediatric medulloblastoma using only CT information Hernandez, Soleil Nguyen, Callistus Gay, Skylar Duryea, Jack Howell, Rebecca Fuentes, David Parkes, Jeannette Burger, Hester Cardenas, Carlos Paulino, Arnold C. Pollard‐Larkin, Julianne Court, Laurence J Appl Clin Med Phys Radiation Oncology Physics PURPOSE: Target delineation for radiation therapy is a time‐consuming and complex task. Autocontouring gross tumor volumes (GTVs) has been shown to increase efficiency. However, there is limited literature on post‐operative target delineation, particularly for CT‐based studies. To this end, we trained a CT‐based autocontouring model to contour the post‐operative GTV of pediatric patients with medulloblastoma. METHODS: One hundred four retrospective pediatric CT scans were used to train a GTV auto‐contouring model. Eighty patients were then preselected for contour visibility, continuity, and location to train an additional model. Each GTV was manually annotated with a visibility score based on the number of slices with a visible GTV (1 = < 25%, 2 = 25–50%, 3 = > 50–75%, and 4 = > 75–100%). Contrast and the contrast‐to‐noise ratio (CNR) were calculated for the GTV contour with respect to a cropped background image. Both models were tested on the original and pre‐selected testing sets. The resulting surface and overlap metrics were calculated comparing the clinical and autocontoured GTVs and the corresponding clinical target volumes (CTVs). RESULTS: Eighty patients were pre‐selected to have a continuous GTV within the posterior fossa. Of these, 7, 41, 21, and 11 were visibly scored as 4, 3, 2, and 1, respectively. The contrast and CNR removed an additional 11 and 20 patients from the dataset, respectively. The Dice similarity coefficients (DSC) were 0.61 ± 0.29 and 0.67 ± 0.22 on the models without pre‐selected training data and 0.55 ± 13.01 and 0.83 ± 0.17 on the models with pre‐selected data, respectively. The DSC on the CTV expansions were 0.90 ± 0.13. CONCLUSION: We successfully automatically contoured continuous GTVs within the posterior fossa on scans that had contrast > ± 10 HU. CT‐Based auto‐contouring algorithms have potential to positively impact centers with limited MRI access. John Wiley and Sons Inc. 2023-03-14 /pmc/articles/PMC10338760/ /pubmed/36917640 http://dx.doi.org/10.1002/acm2.13956 Text en © 2023 The Authors. Journal of Applied Clinical Medical Physics published by Wiley Periodicals, LLC on behalf of The American Association of Physicists in Medicine. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Radiation Oncology Physics Hernandez, Soleil Nguyen, Callistus Gay, Skylar Duryea, Jack Howell, Rebecca Fuentes, David Parkes, Jeannette Burger, Hester Cardenas, Carlos Paulino, Arnold C. Pollard‐Larkin, Julianne Court, Laurence Resection cavity auto‐contouring for patients with pediatric medulloblastoma using only CT information |
title | Resection cavity auto‐contouring for patients with pediatric medulloblastoma using only CT information |
title_full | Resection cavity auto‐contouring for patients with pediatric medulloblastoma using only CT information |
title_fullStr | Resection cavity auto‐contouring for patients with pediatric medulloblastoma using only CT information |
title_full_unstemmed | Resection cavity auto‐contouring for patients with pediatric medulloblastoma using only CT information |
title_short | Resection cavity auto‐contouring for patients with pediatric medulloblastoma using only CT information |
title_sort | resection cavity auto‐contouring for patients with pediatric medulloblastoma using only ct information |
topic | Radiation Oncology Physics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10338760/ https://www.ncbi.nlm.nih.gov/pubmed/36917640 http://dx.doi.org/10.1002/acm2.13956 |
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