Cargando…

Integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes

Fenugreek is an ancient herb that has been used for centuries to treat diabetes. However, how the fenugreek‐derived chemical compounds work in treating diabetes remains unclarified. Herein, we integrate molecular docking and network pharmacology to elucidate the active constituents and potential mec...

Descripción completa

Detalles Bibliográficos
Autores principales: Luo, Wenfeng, Deng, Jie, He, Jiecheng, Yin, Liang, You, Rong, Zhang, Lingkun, Shen, Jian, Han, Zeping, Xie, Fangmei, He, Jinhua, Guan, Yanqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10339091/
https://www.ncbi.nlm.nih.gov/pubmed/37257051
http://dx.doi.org/10.1111/jcmm.17787
_version_ 1785071775451709440
author Luo, Wenfeng
Deng, Jie
He, Jiecheng
Yin, Liang
You, Rong
Zhang, Lingkun
Shen, Jian
Han, Zeping
Xie, Fangmei
He, Jinhua
Guan, Yanqing
author_facet Luo, Wenfeng
Deng, Jie
He, Jiecheng
Yin, Liang
You, Rong
Zhang, Lingkun
Shen, Jian
Han, Zeping
Xie, Fangmei
He, Jinhua
Guan, Yanqing
author_sort Luo, Wenfeng
collection PubMed
description Fenugreek is an ancient herb that has been used for centuries to treat diabetes. However, how the fenugreek‐derived chemical compounds work in treating diabetes remains unclarified. Herein, we integrate molecular docking and network pharmacology to elucidate the active constituents and potential mechanisms of fenugreek against diabetes. First, 19 active compounds from fenugreek and 71 key diabetes‐related targets were identified through network pharmacology analysis. Then, molecular docking and simulations results suggest diosgenin, luteolin and quercetin against diabetes via regulation of the genes ESR1, CAV1, VEGFA, TP53, CAT, AKT1, IL6 and IL1. These compounds and genes may be key factors of fenugreek in treating diabetes. Cells results demonstrate that fenugreek has good biological safety and can effectively improve the glucose consumption of IR‐HepG2 cells. Pathway enrichment analysis revealed that the anti‐diabetic effect of fenugreek was regulated by the AGE‐RAGE and NF‐κB signalling pathways. It is mainly associated with anti‐oxidative stress, anti‐inflammatory response and β‐cell protection. Our study identified the active constituents and potential signalling pathways involved in the anti‐diabetic effect of fenugreek. These findings provide a theoretical basis for understanding the mechanism of the anti‐diabetic effect of fenugreek. Finally, this study may help for developing anti‐diabetic dietary supplements or drugs based on fenugreek.
format Online
Article
Text
id pubmed-10339091
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-103390912023-07-14 Integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes Luo, Wenfeng Deng, Jie He, Jiecheng Yin, Liang You, Rong Zhang, Lingkun Shen, Jian Han, Zeping Xie, Fangmei He, Jinhua Guan, Yanqing J Cell Mol Med Original Articles Fenugreek is an ancient herb that has been used for centuries to treat diabetes. However, how the fenugreek‐derived chemical compounds work in treating diabetes remains unclarified. Herein, we integrate molecular docking and network pharmacology to elucidate the active constituents and potential mechanisms of fenugreek against diabetes. First, 19 active compounds from fenugreek and 71 key diabetes‐related targets were identified through network pharmacology analysis. Then, molecular docking and simulations results suggest diosgenin, luteolin and quercetin against diabetes via regulation of the genes ESR1, CAV1, VEGFA, TP53, CAT, AKT1, IL6 and IL1. These compounds and genes may be key factors of fenugreek in treating diabetes. Cells results demonstrate that fenugreek has good biological safety and can effectively improve the glucose consumption of IR‐HepG2 cells. Pathway enrichment analysis revealed that the anti‐diabetic effect of fenugreek was regulated by the AGE‐RAGE and NF‐κB signalling pathways. It is mainly associated with anti‐oxidative stress, anti‐inflammatory response and β‐cell protection. Our study identified the active constituents and potential signalling pathways involved in the anti‐diabetic effect of fenugreek. These findings provide a theoretical basis for understanding the mechanism of the anti‐diabetic effect of fenugreek. Finally, this study may help for developing anti‐diabetic dietary supplements or drugs based on fenugreek. John Wiley and Sons Inc. 2023-05-31 /pmc/articles/PMC10339091/ /pubmed/37257051 http://dx.doi.org/10.1111/jcmm.17787 Text en © 2023 The Authors. Journal of Cellular and Molecular Medicine published by Foundation for Cellular and Molecular Medicine and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Luo, Wenfeng
Deng, Jie
He, Jiecheng
Yin, Liang
You, Rong
Zhang, Lingkun
Shen, Jian
Han, Zeping
Xie, Fangmei
He, Jinhua
Guan, Yanqing
Integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes
title Integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes
title_full Integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes
title_fullStr Integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes
title_full_unstemmed Integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes
title_short Integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes
title_sort integration of molecular docking, molecular dynamics and network pharmacology to explore the multi‐target pharmacology of fenugreek against diabetes
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10339091/
https://www.ncbi.nlm.nih.gov/pubmed/37257051
http://dx.doi.org/10.1111/jcmm.17787
work_keys_str_mv AT luowenfeng integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT dengjie integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT hejiecheng integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT yinliang integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT yourong integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT zhanglingkun integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT shenjian integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT hanzeping integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT xiefangmei integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT hejinhua integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes
AT guanyanqing integrationofmoleculardockingmoleculardynamicsandnetworkpharmacologytoexplorethemultitargetpharmacologyoffenugreekagainstdiabetes