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Explainable CAD System for Classification of Acute Lymphoblastic Leukemia Based on a Robust White Blood Cell Segmentation

SIMPLE SUMMARY: Leukemia is a type of cancer that affects white blood cells and can lead to serious health problems and death. Diagnosing leukemia is currently performed through a combination of morphological and molecular criteria, which can be time-consuming and, in some cases, unreliable. Compute...

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Autores principales: Diaz Resendiz, Jose Luis, Ponomaryov, Volodymyr, Reyes Reyes, Rogelio, Sadovnychiy, Sergiy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10340488/
https://www.ncbi.nlm.nih.gov/pubmed/37444486
http://dx.doi.org/10.3390/cancers15133376
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author Diaz Resendiz, Jose Luis
Ponomaryov, Volodymyr
Reyes Reyes, Rogelio
Sadovnychiy, Sergiy
author_facet Diaz Resendiz, Jose Luis
Ponomaryov, Volodymyr
Reyes Reyes, Rogelio
Sadovnychiy, Sergiy
author_sort Diaz Resendiz, Jose Luis
collection PubMed
description SIMPLE SUMMARY: Leukemia is a type of cancer that affects white blood cells and can lead to serious health problems and death. Diagnosing leukemia is currently performed through a combination of morphological and molecular criteria, which can be time-consuming and, in some cases, unreliable. Computer-aided diagnosis (CAD) systems based on deep-learning methods have shown promise in improving diagnosis efficiency and accuracy. However, these systems suffer from the “black box problem,” which can lead to incorrect classifications. This research proposes a novel deep-learning approach with visual explainability for ALL diagnoses based on robust white blood cell nuclei segmentation to provide a highly reliable and interpretable classification. The aim is to develop a CAD system that can assist physicians in diagnosing leukemia more efficiently, potentially improving patient outcomes. The findings of this research may impact the research community by providing a more reliable and explainable deep-learning-based approach to blood disorder diagnosis. ABSTRACT: Leukemia is a significant health challenge, with high incidence and mortality rates. Computer-aided diagnosis (CAD) has emerged as a promising approach. However, deep-learning methods suffer from the “black box problem”, leading to unreliable diagnoses. This research proposes an Explainable AI (XAI) Leukemia classification method that addresses this issue by incorporating a robust White Blood Cell (WBC) nuclei segmentation as a hard attention mechanism. The segmentation of WBC is achieved by combining image processing and U-Net techniques, resulting in improved overall performance. The segmented images are fed into modified ResNet-50 models, where the MLP classifier, activation functions, and training scheme have been tested for leukemia subtype classification. Additionally, we add visual explainability and feature space analysis techniques to offer an interpretable classification. Our segmentation algorithm achieves an Intersection over Union (IoU) of 0.91, in six databases. Furthermore, the deep-learning classifier achieves an accuracy of 99.9% on testing. The Grad CAM methods and clustering space analysis confirm improved network focus when classifying segmented images compared to non-segmented images. Overall, the proposed visual explainable CAD system has the potential to assist physicians in diagnosing leukemia and improving patient outcomes.
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spelling pubmed-103404882023-07-14 Explainable CAD System for Classification of Acute Lymphoblastic Leukemia Based on a Robust White Blood Cell Segmentation Diaz Resendiz, Jose Luis Ponomaryov, Volodymyr Reyes Reyes, Rogelio Sadovnychiy, Sergiy Cancers (Basel) Article SIMPLE SUMMARY: Leukemia is a type of cancer that affects white blood cells and can lead to serious health problems and death. Diagnosing leukemia is currently performed through a combination of morphological and molecular criteria, which can be time-consuming and, in some cases, unreliable. Computer-aided diagnosis (CAD) systems based on deep-learning methods have shown promise in improving diagnosis efficiency and accuracy. However, these systems suffer from the “black box problem,” which can lead to incorrect classifications. This research proposes a novel deep-learning approach with visual explainability for ALL diagnoses based on robust white blood cell nuclei segmentation to provide a highly reliable and interpretable classification. The aim is to develop a CAD system that can assist physicians in diagnosing leukemia more efficiently, potentially improving patient outcomes. The findings of this research may impact the research community by providing a more reliable and explainable deep-learning-based approach to blood disorder diagnosis. ABSTRACT: Leukemia is a significant health challenge, with high incidence and mortality rates. Computer-aided diagnosis (CAD) has emerged as a promising approach. However, deep-learning methods suffer from the “black box problem”, leading to unreliable diagnoses. This research proposes an Explainable AI (XAI) Leukemia classification method that addresses this issue by incorporating a robust White Blood Cell (WBC) nuclei segmentation as a hard attention mechanism. The segmentation of WBC is achieved by combining image processing and U-Net techniques, resulting in improved overall performance. The segmented images are fed into modified ResNet-50 models, where the MLP classifier, activation functions, and training scheme have been tested for leukemia subtype classification. Additionally, we add visual explainability and feature space analysis techniques to offer an interpretable classification. Our segmentation algorithm achieves an Intersection over Union (IoU) of 0.91, in six databases. Furthermore, the deep-learning classifier achieves an accuracy of 99.9% on testing. The Grad CAM methods and clustering space analysis confirm improved network focus when classifying segmented images compared to non-segmented images. Overall, the proposed visual explainable CAD system has the potential to assist physicians in diagnosing leukemia and improving patient outcomes. MDPI 2023-06-27 /pmc/articles/PMC10340488/ /pubmed/37444486 http://dx.doi.org/10.3390/cancers15133376 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Diaz Resendiz, Jose Luis
Ponomaryov, Volodymyr
Reyes Reyes, Rogelio
Sadovnychiy, Sergiy
Explainable CAD System for Classification of Acute Lymphoblastic Leukemia Based on a Robust White Blood Cell Segmentation
title Explainable CAD System for Classification of Acute Lymphoblastic Leukemia Based on a Robust White Blood Cell Segmentation
title_full Explainable CAD System for Classification of Acute Lymphoblastic Leukemia Based on a Robust White Blood Cell Segmentation
title_fullStr Explainable CAD System for Classification of Acute Lymphoblastic Leukemia Based on a Robust White Blood Cell Segmentation
title_full_unstemmed Explainable CAD System for Classification of Acute Lymphoblastic Leukemia Based on a Robust White Blood Cell Segmentation
title_short Explainable CAD System for Classification of Acute Lymphoblastic Leukemia Based on a Robust White Blood Cell Segmentation
title_sort explainable cad system for classification of acute lymphoblastic leukemia based on a robust white blood cell segmentation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10340488/
https://www.ncbi.nlm.nih.gov/pubmed/37444486
http://dx.doi.org/10.3390/cancers15133376
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