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Tubular Structure Segmentation via Multi-Scale Reverse Attention Sparse Convolution

Cerebrovascular and airway structures are tubular structures used for transporting blood and gases, respectively, providing essential support for the normal activities of the human body. Accurately segmenting these tubular structures is the basis of morphology research and pathological detection. Ne...

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Autores principales: Zeng, Xueqiang, Guo, Yingwei, Zaman, Asim, Hassan, Haseeb, Lu, Jiaxi, Xu, Jiaxuan, Yang, Huihui, Miao, Xiaoqiang, Cao, Anbo, Yang, Yingjian, Chen, Rongchang, Kang, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10340561/
https://www.ncbi.nlm.nih.gov/pubmed/37443556
http://dx.doi.org/10.3390/diagnostics13132161
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author Zeng, Xueqiang
Guo, Yingwei
Zaman, Asim
Hassan, Haseeb
Lu, Jiaxi
Xu, Jiaxuan
Yang, Huihui
Miao, Xiaoqiang
Cao, Anbo
Yang, Yingjian
Chen, Rongchang
Kang, Yan
author_facet Zeng, Xueqiang
Guo, Yingwei
Zaman, Asim
Hassan, Haseeb
Lu, Jiaxi
Xu, Jiaxuan
Yang, Huihui
Miao, Xiaoqiang
Cao, Anbo
Yang, Yingjian
Chen, Rongchang
Kang, Yan
author_sort Zeng, Xueqiang
collection PubMed
description Cerebrovascular and airway structures are tubular structures used for transporting blood and gases, respectively, providing essential support for the normal activities of the human body. Accurately segmenting these tubular structures is the basis of morphology research and pathological detection. Nevertheless, accurately segmenting these structures from images presents great challenges due to their complex morphological and topological characteristics. To address this challenge, this paper proposes a framework UARAI based on the U-Net multi-scale reverse attention network and sparse convolution network. The framework utilizes a multi-scale structure to effectively extract the global and deep detail features of vessels and airways. Further, it enhances the extraction ability of fine-edged features by a joint reverse attention module. In addition, the sparse convolution structure is introduced to improve the features’ expression ability without increasing the model’s complexity. Finally, the proposed training sample cropping strategy reduces the influence of block boundaries on the accuracy of tubular structure segmentation. The experimental findings demonstrate that the UARAI-based metrics, namely Dice and IoU, achieve impressive scores of 90.31% and 82.33% for cerebrovascular segmentation and 93.34% and 87.51% for airway segmentation, respectively. Compared to commonly employed segmentation techniques, the proposed method exhibits remarkable accuracy and robustness in delineating tubular structures such as cerebrovascular and airway structures. These results hold significant promise in facilitating medical image analysis and clinical diagnosis, offering invaluable support to healthcare professionals.
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spelling pubmed-103405612023-07-14 Tubular Structure Segmentation via Multi-Scale Reverse Attention Sparse Convolution Zeng, Xueqiang Guo, Yingwei Zaman, Asim Hassan, Haseeb Lu, Jiaxi Xu, Jiaxuan Yang, Huihui Miao, Xiaoqiang Cao, Anbo Yang, Yingjian Chen, Rongchang Kang, Yan Diagnostics (Basel) Article Cerebrovascular and airway structures are tubular structures used for transporting blood and gases, respectively, providing essential support for the normal activities of the human body. Accurately segmenting these tubular structures is the basis of morphology research and pathological detection. Nevertheless, accurately segmenting these structures from images presents great challenges due to their complex morphological and topological characteristics. To address this challenge, this paper proposes a framework UARAI based on the U-Net multi-scale reverse attention network and sparse convolution network. The framework utilizes a multi-scale structure to effectively extract the global and deep detail features of vessels and airways. Further, it enhances the extraction ability of fine-edged features by a joint reverse attention module. In addition, the sparse convolution structure is introduced to improve the features’ expression ability without increasing the model’s complexity. Finally, the proposed training sample cropping strategy reduces the influence of block boundaries on the accuracy of tubular structure segmentation. The experimental findings demonstrate that the UARAI-based metrics, namely Dice and IoU, achieve impressive scores of 90.31% and 82.33% for cerebrovascular segmentation and 93.34% and 87.51% for airway segmentation, respectively. Compared to commonly employed segmentation techniques, the proposed method exhibits remarkable accuracy and robustness in delineating tubular structures such as cerebrovascular and airway structures. These results hold significant promise in facilitating medical image analysis and clinical diagnosis, offering invaluable support to healthcare professionals. MDPI 2023-06-25 /pmc/articles/PMC10340561/ /pubmed/37443556 http://dx.doi.org/10.3390/diagnostics13132161 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zeng, Xueqiang
Guo, Yingwei
Zaman, Asim
Hassan, Haseeb
Lu, Jiaxi
Xu, Jiaxuan
Yang, Huihui
Miao, Xiaoqiang
Cao, Anbo
Yang, Yingjian
Chen, Rongchang
Kang, Yan
Tubular Structure Segmentation via Multi-Scale Reverse Attention Sparse Convolution
title Tubular Structure Segmentation via Multi-Scale Reverse Attention Sparse Convolution
title_full Tubular Structure Segmentation via Multi-Scale Reverse Attention Sparse Convolution
title_fullStr Tubular Structure Segmentation via Multi-Scale Reverse Attention Sparse Convolution
title_full_unstemmed Tubular Structure Segmentation via Multi-Scale Reverse Attention Sparse Convolution
title_short Tubular Structure Segmentation via Multi-Scale Reverse Attention Sparse Convolution
title_sort tubular structure segmentation via multi-scale reverse attention sparse convolution
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10340561/
https://www.ncbi.nlm.nih.gov/pubmed/37443556
http://dx.doi.org/10.3390/diagnostics13132161
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