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Annotation-Efficient Deep Learning Model for Pancreatic Cancer Diagnosis and Classification Using CT Images: A Retrospective Diagnostic Study

SIMPLE SUMMARY: In computer-assisted diagnostics for pancreatic cancer, attributes featuring irregular contours and indistinct boundaries on CT images present challenges in acquiring high-quality annotations. In response to this issue, we have devised an innovative self-supervised learning algorithm...

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Autores principales: Viriyasaranon, Thanaporn, Chun, Jung Won, Koh, Young Hwan, Cho, Jae Hee, Jung, Min Kyu, Kim, Seong-Hun, Kim, Hyo Jung, Lee, Woo Jin, Choi, Jang-Hwan, Woo, Sang Myung
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10340780/
https://www.ncbi.nlm.nih.gov/pubmed/37444502
http://dx.doi.org/10.3390/cancers15133392
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author Viriyasaranon, Thanaporn
Chun, Jung Won
Koh, Young Hwan
Cho, Jae Hee
Jung, Min Kyu
Kim, Seong-Hun
Kim, Hyo Jung
Lee, Woo Jin
Choi, Jang-Hwan
Woo, Sang Myung
author_facet Viriyasaranon, Thanaporn
Chun, Jung Won
Koh, Young Hwan
Cho, Jae Hee
Jung, Min Kyu
Kim, Seong-Hun
Kim, Hyo Jung
Lee, Woo Jin
Choi, Jang-Hwan
Woo, Sang Myung
author_sort Viriyasaranon, Thanaporn
collection PubMed
description SIMPLE SUMMARY: In computer-assisted diagnostics for pancreatic cancer, attributes featuring irregular contours and indistinct boundaries on CT images present challenges in acquiring high-quality annotations. In response to this issue, we have devised an innovative self-supervised learning algorithm, engineered to enhance the differentiation of malignant and benign lesions. This innovation obviates the necessity for radiologist intervention, thus facilitating the precise classification of pancreatic cancer. By employing a pseudo-lesion segmentation self-supervised learning model, which capitalizes on automatically generated high-quality training data, we have managed to significantly elevate the performance of both convolutional neural network-based and transformer-based deep learning models. ABSTRACT: The aim of this study was to develop a novel deep learning (DL) model without requiring large-annotated training datasets for detecting pancreatic cancer (PC) using computed tomography (CT) images. This retrospective diagnostic study was conducted using CT images collected from 2004 and 2019 from 4287 patients diagnosed with PC. We proposed a self-supervised learning algorithm (pseudo-lesion segmentation (PS)) for PC classification, which was trained with and without PS and validated on randomly divided training and validation sets. We further performed cross-racial external validation using open-access CT images from 361 patients. For internal validation, the accuracy and sensitivity for PC classification were 94.3% (92.8–95.4%) and 92.5% (90.0–94.4%), and 95.7% (94.5–96.7%) and 99.3 (98.4–99.7%) for the convolutional neural network (CNN) and transformer-based DL models (both with PS), respectively. Implementing PS on a small-sized training dataset (randomly sampled 10%) increased accuracy by 20.5% and sensitivity by 37.0%. For external validation, the accuracy and sensitivity were 82.5% (78.3–86.1%) and 81.7% (77.3–85.4%) and 87.8% (84.0–90.8%) and 86.5% (82.3–89.8%) for the CNN and transformer-based DL models (both with PS), respectively. PS self-supervised learning can increase DL-based PC classification performance, reliability, and robustness of the model for unseen, and even small, datasets. The proposed DL model is potentially useful for PC diagnosis.
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spelling pubmed-103407802023-07-14 Annotation-Efficient Deep Learning Model for Pancreatic Cancer Diagnosis and Classification Using CT Images: A Retrospective Diagnostic Study Viriyasaranon, Thanaporn Chun, Jung Won Koh, Young Hwan Cho, Jae Hee Jung, Min Kyu Kim, Seong-Hun Kim, Hyo Jung Lee, Woo Jin Choi, Jang-Hwan Woo, Sang Myung Cancers (Basel) Article SIMPLE SUMMARY: In computer-assisted diagnostics for pancreatic cancer, attributes featuring irregular contours and indistinct boundaries on CT images present challenges in acquiring high-quality annotations. In response to this issue, we have devised an innovative self-supervised learning algorithm, engineered to enhance the differentiation of malignant and benign lesions. This innovation obviates the necessity for radiologist intervention, thus facilitating the precise classification of pancreatic cancer. By employing a pseudo-lesion segmentation self-supervised learning model, which capitalizes on automatically generated high-quality training data, we have managed to significantly elevate the performance of both convolutional neural network-based and transformer-based deep learning models. ABSTRACT: The aim of this study was to develop a novel deep learning (DL) model without requiring large-annotated training datasets for detecting pancreatic cancer (PC) using computed tomography (CT) images. This retrospective diagnostic study was conducted using CT images collected from 2004 and 2019 from 4287 patients diagnosed with PC. We proposed a self-supervised learning algorithm (pseudo-lesion segmentation (PS)) for PC classification, which was trained with and without PS and validated on randomly divided training and validation sets. We further performed cross-racial external validation using open-access CT images from 361 patients. For internal validation, the accuracy and sensitivity for PC classification were 94.3% (92.8–95.4%) and 92.5% (90.0–94.4%), and 95.7% (94.5–96.7%) and 99.3 (98.4–99.7%) for the convolutional neural network (CNN) and transformer-based DL models (both with PS), respectively. Implementing PS on a small-sized training dataset (randomly sampled 10%) increased accuracy by 20.5% and sensitivity by 37.0%. For external validation, the accuracy and sensitivity were 82.5% (78.3–86.1%) and 81.7% (77.3–85.4%) and 87.8% (84.0–90.8%) and 86.5% (82.3–89.8%) for the CNN and transformer-based DL models (both with PS), respectively. PS self-supervised learning can increase DL-based PC classification performance, reliability, and robustness of the model for unseen, and even small, datasets. The proposed DL model is potentially useful for PC diagnosis. MDPI 2023-06-28 /pmc/articles/PMC10340780/ /pubmed/37444502 http://dx.doi.org/10.3390/cancers15133392 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Viriyasaranon, Thanaporn
Chun, Jung Won
Koh, Young Hwan
Cho, Jae Hee
Jung, Min Kyu
Kim, Seong-Hun
Kim, Hyo Jung
Lee, Woo Jin
Choi, Jang-Hwan
Woo, Sang Myung
Annotation-Efficient Deep Learning Model for Pancreatic Cancer Diagnosis and Classification Using CT Images: A Retrospective Diagnostic Study
title Annotation-Efficient Deep Learning Model for Pancreatic Cancer Diagnosis and Classification Using CT Images: A Retrospective Diagnostic Study
title_full Annotation-Efficient Deep Learning Model for Pancreatic Cancer Diagnosis and Classification Using CT Images: A Retrospective Diagnostic Study
title_fullStr Annotation-Efficient Deep Learning Model for Pancreatic Cancer Diagnosis and Classification Using CT Images: A Retrospective Diagnostic Study
title_full_unstemmed Annotation-Efficient Deep Learning Model for Pancreatic Cancer Diagnosis and Classification Using CT Images: A Retrospective Diagnostic Study
title_short Annotation-Efficient Deep Learning Model for Pancreatic Cancer Diagnosis and Classification Using CT Images: A Retrospective Diagnostic Study
title_sort annotation-efficient deep learning model for pancreatic cancer diagnosis and classification using ct images: a retrospective diagnostic study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10340780/
https://www.ncbi.nlm.nih.gov/pubmed/37444502
http://dx.doi.org/10.3390/cancers15133392
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