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“Omics” Techniques Used in Marine Biofouling Studies

Biofouling is the growth of organisms on wet surfaces. Biofouling includes micro- (bacteria and unicellular algae) and macrofouling (mussels, barnacles, tube worms, bryozoans, etc.) and is a major problem for industries. However, the settlement and growth of some biofouling species, like oysters and...

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Autores principales: Dobretsov, Sergey, Rittschof, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10342002/
https://www.ncbi.nlm.nih.gov/pubmed/37445696
http://dx.doi.org/10.3390/ijms241310518
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author Dobretsov, Sergey
Rittschof, Daniel
author_facet Dobretsov, Sergey
Rittschof, Daniel
author_sort Dobretsov, Sergey
collection PubMed
description Biofouling is the growth of organisms on wet surfaces. Biofouling includes micro- (bacteria and unicellular algae) and macrofouling (mussels, barnacles, tube worms, bryozoans, etc.) and is a major problem for industries. However, the settlement and growth of some biofouling species, like oysters and corals, can be desirable. Thus, it is important to understand the process of biofouling in detail. Modern “omic” techniques, such as metabolomics, metagenomics, transcriptomics, and proteomics, provide unique opportunities to study biofouling organisms and communities and investigate their metabolites and environmental interactions. In this review, we analyze the recent publications that employ metagenomic, metabolomic, and proteomic techniques for the investigation of biofouling and biofouling organisms. Specific emphasis is given to metagenomics, proteomics and publications using combinations of different “omics” techniques. Finally, this review presents the future outlook for the use of “omics” techniques in marine biofouling studies. Like all trans-disciplinary research, environmental “omics” is in its infancy and will advance rapidly as researchers develop the necessary expertise, theory, and technology.
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spelling pubmed-103420022023-07-14 “Omics” Techniques Used in Marine Biofouling Studies Dobretsov, Sergey Rittschof, Daniel Int J Mol Sci Review Biofouling is the growth of organisms on wet surfaces. Biofouling includes micro- (bacteria and unicellular algae) and macrofouling (mussels, barnacles, tube worms, bryozoans, etc.) and is a major problem for industries. However, the settlement and growth of some biofouling species, like oysters and corals, can be desirable. Thus, it is important to understand the process of biofouling in detail. Modern “omic” techniques, such as metabolomics, metagenomics, transcriptomics, and proteomics, provide unique opportunities to study biofouling organisms and communities and investigate their metabolites and environmental interactions. In this review, we analyze the recent publications that employ metagenomic, metabolomic, and proteomic techniques for the investigation of biofouling and biofouling organisms. Specific emphasis is given to metagenomics, proteomics and publications using combinations of different “omics” techniques. Finally, this review presents the future outlook for the use of “omics” techniques in marine biofouling studies. Like all trans-disciplinary research, environmental “omics” is in its infancy and will advance rapidly as researchers develop the necessary expertise, theory, and technology. MDPI 2023-06-23 /pmc/articles/PMC10342002/ /pubmed/37445696 http://dx.doi.org/10.3390/ijms241310518 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Dobretsov, Sergey
Rittschof, Daniel
“Omics” Techniques Used in Marine Biofouling Studies
title “Omics” Techniques Used in Marine Biofouling Studies
title_full “Omics” Techniques Used in Marine Biofouling Studies
title_fullStr “Omics” Techniques Used in Marine Biofouling Studies
title_full_unstemmed “Omics” Techniques Used in Marine Biofouling Studies
title_short “Omics” Techniques Used in Marine Biofouling Studies
title_sort “omics” techniques used in marine biofouling studies
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10342002/
https://www.ncbi.nlm.nih.gov/pubmed/37445696
http://dx.doi.org/10.3390/ijms241310518
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