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A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides

Food protein-derived antihypertensive peptides are a representative type of bioactive peptides. Several models based on partial least squares regression have been constructed to delineate the relationship between the structure and activity of the peptides. Machine-learning-based models have been app...

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Detalles Bibliográficos
Autores principales: Liao, Wang, Yan, Siyuan, Cao, Xinyi, Xia, Hui, Wang, Shaokang, Sun, Guiju, Cai, Kaida
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343800/
https://www.ncbi.nlm.nih.gov/pubmed/37446561
http://dx.doi.org/10.3390/molecules28134901
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author Liao, Wang
Yan, Siyuan
Cao, Xinyi
Xia, Hui
Wang, Shaokang
Sun, Guiju
Cai, Kaida
author_facet Liao, Wang
Yan, Siyuan
Cao, Xinyi
Xia, Hui
Wang, Shaokang
Sun, Guiju
Cai, Kaida
author_sort Liao, Wang
collection PubMed
description Food protein-derived antihypertensive peptides are a representative type of bioactive peptides. Several models based on partial least squares regression have been constructed to delineate the relationship between the structure and activity of the peptides. Machine-learning-based models have been applied in broad areas, which also indicates their potential to be incorporated into the field of bioactive peptides. In this study, a long short-term memory (LSTM) algorithm-based deep learning model was constructed, which could predict the IC(50) value of the peptide in inhibiting ACE activity. In addition to the test dataset, the model was also validated using randomly synthesized peptides. The LSTM-based model constructed in this study provides an efficient and simplified method for screening antihypertensive peptides from food proteins.
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spelling pubmed-103438002023-07-14 A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides Liao, Wang Yan, Siyuan Cao, Xinyi Xia, Hui Wang, Shaokang Sun, Guiju Cai, Kaida Molecules Article Food protein-derived antihypertensive peptides are a representative type of bioactive peptides. Several models based on partial least squares regression have been constructed to delineate the relationship between the structure and activity of the peptides. Machine-learning-based models have been applied in broad areas, which also indicates their potential to be incorporated into the field of bioactive peptides. In this study, a long short-term memory (LSTM) algorithm-based deep learning model was constructed, which could predict the IC(50) value of the peptide in inhibiting ACE activity. In addition to the test dataset, the model was also validated using randomly synthesized peptides. The LSTM-based model constructed in this study provides an efficient and simplified method for screening antihypertensive peptides from food proteins. MDPI 2023-06-21 /pmc/articles/PMC10343800/ /pubmed/37446561 http://dx.doi.org/10.3390/molecules28134901 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Liao, Wang
Yan, Siyuan
Cao, Xinyi
Xia, Hui
Wang, Shaokang
Sun, Guiju
Cai, Kaida
A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides
title A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides
title_full A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides
title_fullStr A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides
title_full_unstemmed A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides
title_short A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides
title_sort novel lstm-based machine learning model for predicting the activity of food protein-derived antihypertensive peptides
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343800/
https://www.ncbi.nlm.nih.gov/pubmed/37446561
http://dx.doi.org/10.3390/molecules28134901
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