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A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides
Food protein-derived antihypertensive peptides are a representative type of bioactive peptides. Several models based on partial least squares regression have been constructed to delineate the relationship between the structure and activity of the peptides. Machine-learning-based models have been app...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343800/ https://www.ncbi.nlm.nih.gov/pubmed/37446561 http://dx.doi.org/10.3390/molecules28134901 |
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author | Liao, Wang Yan, Siyuan Cao, Xinyi Xia, Hui Wang, Shaokang Sun, Guiju Cai, Kaida |
author_facet | Liao, Wang Yan, Siyuan Cao, Xinyi Xia, Hui Wang, Shaokang Sun, Guiju Cai, Kaida |
author_sort | Liao, Wang |
collection | PubMed |
description | Food protein-derived antihypertensive peptides are a representative type of bioactive peptides. Several models based on partial least squares regression have been constructed to delineate the relationship between the structure and activity of the peptides. Machine-learning-based models have been applied in broad areas, which also indicates their potential to be incorporated into the field of bioactive peptides. In this study, a long short-term memory (LSTM) algorithm-based deep learning model was constructed, which could predict the IC(50) value of the peptide in inhibiting ACE activity. In addition to the test dataset, the model was also validated using randomly synthesized peptides. The LSTM-based model constructed in this study provides an efficient and simplified method for screening antihypertensive peptides from food proteins. |
format | Online Article Text |
id | pubmed-10343800 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-103438002023-07-14 A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides Liao, Wang Yan, Siyuan Cao, Xinyi Xia, Hui Wang, Shaokang Sun, Guiju Cai, Kaida Molecules Article Food protein-derived antihypertensive peptides are a representative type of bioactive peptides. Several models based on partial least squares regression have been constructed to delineate the relationship between the structure and activity of the peptides. Machine-learning-based models have been applied in broad areas, which also indicates their potential to be incorporated into the field of bioactive peptides. In this study, a long short-term memory (LSTM) algorithm-based deep learning model was constructed, which could predict the IC(50) value of the peptide in inhibiting ACE activity. In addition to the test dataset, the model was also validated using randomly synthesized peptides. The LSTM-based model constructed in this study provides an efficient and simplified method for screening antihypertensive peptides from food proteins. MDPI 2023-06-21 /pmc/articles/PMC10343800/ /pubmed/37446561 http://dx.doi.org/10.3390/molecules28134901 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Liao, Wang Yan, Siyuan Cao, Xinyi Xia, Hui Wang, Shaokang Sun, Guiju Cai, Kaida A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides |
title | A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides |
title_full | A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides |
title_fullStr | A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides |
title_full_unstemmed | A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides |
title_short | A Novel LSTM-Based Machine Learning Model for Predicting the Activity of Food Protein-Derived Antihypertensive Peptides |
title_sort | novel lstm-based machine learning model for predicting the activity of food protein-derived antihypertensive peptides |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10343800/ https://www.ncbi.nlm.nih.gov/pubmed/37446561 http://dx.doi.org/10.3390/molecules28134901 |
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