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Single cell RNA sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages

Alveolar macrophages (AMs) are resident innate immune cells that play vital roles in maintaining lung physiological functions. However, the effects of aging on their dynamics, heterogeneity, and transcriptional profiles remain to be fully elucidated. Through single cell RNA sequencing (scRNA-seq), w...

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Autores principales: Wu, Yue, Hu, Shengen Shawn, Zhang, Ruixuan, Goplen, Nick P., Gao, Xiaochen, Narasimhan, Harish, Shi, Ao, Chen, Yin, Li, Ying, Zang, Chongzhi, Dong, Haidong, Braciale, Thomas J., Zhu, Bibo, Sun, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10344965/
https://www.ncbi.nlm.nih.gov/pubmed/37456831
http://dx.doi.org/10.1016/j.isci.2023.107197
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author Wu, Yue
Hu, Shengen Shawn
Zhang, Ruixuan
Goplen, Nick P.
Gao, Xiaochen
Narasimhan, Harish
Shi, Ao
Chen, Yin
Li, Ying
Zang, Chongzhi
Dong, Haidong
Braciale, Thomas J.
Zhu, Bibo
Sun, Jie
author_facet Wu, Yue
Hu, Shengen Shawn
Zhang, Ruixuan
Goplen, Nick P.
Gao, Xiaochen
Narasimhan, Harish
Shi, Ao
Chen, Yin
Li, Ying
Zang, Chongzhi
Dong, Haidong
Braciale, Thomas J.
Zhu, Bibo
Sun, Jie
author_sort Wu, Yue
collection PubMed
description Alveolar macrophages (AMs) are resident innate immune cells that play vital roles in maintaining lung physiological functions. However, the effects of aging on their dynamics, heterogeneity, and transcriptional profiles remain to be fully elucidated. Through single cell RNA sequencing (scRNA-seq), we identified CBFβ as an indispensable transcription factor that ensures AM self-renewal. Intriguingly, despite transcriptome similarities of proliferating cells, AMs from aged mice exhibited reduced embryonic stem cell–like features. Aged AMs also displayed compromised DNA repair abilities, potentially leading to obstructed cell cycle progression and an elevation of senescence markers. Consistently, AMs from aged mice exhibited impaired self-renewal ability and reduced sensitivity to GM-CSF. Decreased CBFβ was observed in the cytosol of AMs from aged mice. Similar senescence-like phenotypes were also found in human AMs. Taken together, these findings suggest that AMs in aged hosts demonstrate senescence-like phenotypes, potentially facilitated by the abrogated CBF [Formula: see text] activity.
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spelling pubmed-103449652023-07-15 Single cell RNA sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages Wu, Yue Hu, Shengen Shawn Zhang, Ruixuan Goplen, Nick P. Gao, Xiaochen Narasimhan, Harish Shi, Ao Chen, Yin Li, Ying Zang, Chongzhi Dong, Haidong Braciale, Thomas J. Zhu, Bibo Sun, Jie iScience Article Alveolar macrophages (AMs) are resident innate immune cells that play vital roles in maintaining lung physiological functions. However, the effects of aging on their dynamics, heterogeneity, and transcriptional profiles remain to be fully elucidated. Through single cell RNA sequencing (scRNA-seq), we identified CBFβ as an indispensable transcription factor that ensures AM self-renewal. Intriguingly, despite transcriptome similarities of proliferating cells, AMs from aged mice exhibited reduced embryonic stem cell–like features. Aged AMs also displayed compromised DNA repair abilities, potentially leading to obstructed cell cycle progression and an elevation of senescence markers. Consistently, AMs from aged mice exhibited impaired self-renewal ability and reduced sensitivity to GM-CSF. Decreased CBFβ was observed in the cytosol of AMs from aged mice. Similar senescence-like phenotypes were also found in human AMs. Taken together, these findings suggest that AMs in aged hosts demonstrate senescence-like phenotypes, potentially facilitated by the abrogated CBF [Formula: see text] activity. Elsevier 2023-06-23 /pmc/articles/PMC10344965/ /pubmed/37456831 http://dx.doi.org/10.1016/j.isci.2023.107197 Text en © 2023 The Authors. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Wu, Yue
Hu, Shengen Shawn
Zhang, Ruixuan
Goplen, Nick P.
Gao, Xiaochen
Narasimhan, Harish
Shi, Ao
Chen, Yin
Li, Ying
Zang, Chongzhi
Dong, Haidong
Braciale, Thomas J.
Zhu, Bibo
Sun, Jie
Single cell RNA sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages
title Single cell RNA sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages
title_full Single cell RNA sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages
title_fullStr Single cell RNA sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages
title_full_unstemmed Single cell RNA sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages
title_short Single cell RNA sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages
title_sort single cell rna sequencing unravels mechanisms underlying senescence-like phenotypes of alveolar macrophages
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10344965/
https://www.ncbi.nlm.nih.gov/pubmed/37456831
http://dx.doi.org/10.1016/j.isci.2023.107197
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