Cargando…

Cervical cell nuclei segmentation based on GC-UNet

Cervical cancer diagnosis hinges significantly on precise nuclei segmentation at early stages, which however, remains largely elusive due to challenges such as overlapping cells and blurred nuclei boundaries. This paper presents a novel deep neural network (DNN), the Global Context UNet (GC-UNet), d...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Enguang, Xie, Rixin, Bian, Yuxin, Wang, Jiayan, Tao, Pengyi, Zhang, Heng, Jiang, Shenlu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10345258/
https://www.ncbi.nlm.nih.gov/pubmed/37456010
http://dx.doi.org/10.1016/j.heliyon.2023.e17647
_version_ 1785073046268149760
author Zhang, Enguang
Xie, Rixin
Bian, Yuxin
Wang, Jiayan
Tao, Pengyi
Zhang, Heng
Jiang, Shenlu
author_facet Zhang, Enguang
Xie, Rixin
Bian, Yuxin
Wang, Jiayan
Tao, Pengyi
Zhang, Heng
Jiang, Shenlu
author_sort Zhang, Enguang
collection PubMed
description Cervical cancer diagnosis hinges significantly on precise nuclei segmentation at early stages, which however, remains largely elusive due to challenges such as overlapping cells and blurred nuclei boundaries. This paper presents a novel deep neural network (DNN), the Global Context UNet (GC-UNet), designed to adeptly handle intricate environments and deliver accurate cell segmentation. At the core of GC-UNet is DenseNet, which serves as the backbone, encoding cell images and capitalizing on pre-existing knowledge. A unique context-aware pooling module, equipped with a gating model, is integrated for effective encoding of ImageNet pre-trained features, ensuring essential features at different levels are retained. Further, a decoder grounded in a global context attention block is employed to foster global feature interaction and refine the predicted masks.
format Online
Article
Text
id pubmed-10345258
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-103452582023-07-15 Cervical cell nuclei segmentation based on GC-UNet Zhang, Enguang Xie, Rixin Bian, Yuxin Wang, Jiayan Tao, Pengyi Zhang, Heng Jiang, Shenlu Heliyon Research Article Cervical cancer diagnosis hinges significantly on precise nuclei segmentation at early stages, which however, remains largely elusive due to challenges such as overlapping cells and blurred nuclei boundaries. This paper presents a novel deep neural network (DNN), the Global Context UNet (GC-UNet), designed to adeptly handle intricate environments and deliver accurate cell segmentation. At the core of GC-UNet is DenseNet, which serves as the backbone, encoding cell images and capitalizing on pre-existing knowledge. A unique context-aware pooling module, equipped with a gating model, is integrated for effective encoding of ImageNet pre-trained features, ensuring essential features at different levels are retained. Further, a decoder grounded in a global context attention block is employed to foster global feature interaction and refine the predicted masks. Elsevier 2023-06-28 /pmc/articles/PMC10345258/ /pubmed/37456010 http://dx.doi.org/10.1016/j.heliyon.2023.e17647 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Zhang, Enguang
Xie, Rixin
Bian, Yuxin
Wang, Jiayan
Tao, Pengyi
Zhang, Heng
Jiang, Shenlu
Cervical cell nuclei segmentation based on GC-UNet
title Cervical cell nuclei segmentation based on GC-UNet
title_full Cervical cell nuclei segmentation based on GC-UNet
title_fullStr Cervical cell nuclei segmentation based on GC-UNet
title_full_unstemmed Cervical cell nuclei segmentation based on GC-UNet
title_short Cervical cell nuclei segmentation based on GC-UNet
title_sort cervical cell nuclei segmentation based on gc-unet
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10345258/
https://www.ncbi.nlm.nih.gov/pubmed/37456010
http://dx.doi.org/10.1016/j.heliyon.2023.e17647
work_keys_str_mv AT zhangenguang cervicalcellnucleisegmentationbasedongcunet
AT xierixin cervicalcellnucleisegmentationbasedongcunet
AT bianyuxin cervicalcellnucleisegmentationbasedongcunet
AT wangjiayan cervicalcellnucleisegmentationbasedongcunet
AT taopengyi cervicalcellnucleisegmentationbasedongcunet
AT zhangheng cervicalcellnucleisegmentationbasedongcunet
AT jiangshenlu cervicalcellnucleisegmentationbasedongcunet