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Cervical cell nuclei segmentation based on GC-UNet
Cervical cancer diagnosis hinges significantly on precise nuclei segmentation at early stages, which however, remains largely elusive due to challenges such as overlapping cells and blurred nuclei boundaries. This paper presents a novel deep neural network (DNN), the Global Context UNet (GC-UNet), d...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10345258/ https://www.ncbi.nlm.nih.gov/pubmed/37456010 http://dx.doi.org/10.1016/j.heliyon.2023.e17647 |
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author | Zhang, Enguang Xie, Rixin Bian, Yuxin Wang, Jiayan Tao, Pengyi Zhang, Heng Jiang, Shenlu |
author_facet | Zhang, Enguang Xie, Rixin Bian, Yuxin Wang, Jiayan Tao, Pengyi Zhang, Heng Jiang, Shenlu |
author_sort | Zhang, Enguang |
collection | PubMed |
description | Cervical cancer diagnosis hinges significantly on precise nuclei segmentation at early stages, which however, remains largely elusive due to challenges such as overlapping cells and blurred nuclei boundaries. This paper presents a novel deep neural network (DNN), the Global Context UNet (GC-UNet), designed to adeptly handle intricate environments and deliver accurate cell segmentation. At the core of GC-UNet is DenseNet, which serves as the backbone, encoding cell images and capitalizing on pre-existing knowledge. A unique context-aware pooling module, equipped with a gating model, is integrated for effective encoding of ImageNet pre-trained features, ensuring essential features at different levels are retained. Further, a decoder grounded in a global context attention block is employed to foster global feature interaction and refine the predicted masks. |
format | Online Article Text |
id | pubmed-10345258 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-103452582023-07-15 Cervical cell nuclei segmentation based on GC-UNet Zhang, Enguang Xie, Rixin Bian, Yuxin Wang, Jiayan Tao, Pengyi Zhang, Heng Jiang, Shenlu Heliyon Research Article Cervical cancer diagnosis hinges significantly on precise nuclei segmentation at early stages, which however, remains largely elusive due to challenges such as overlapping cells and blurred nuclei boundaries. This paper presents a novel deep neural network (DNN), the Global Context UNet (GC-UNet), designed to adeptly handle intricate environments and deliver accurate cell segmentation. At the core of GC-UNet is DenseNet, which serves as the backbone, encoding cell images and capitalizing on pre-existing knowledge. A unique context-aware pooling module, equipped with a gating model, is integrated for effective encoding of ImageNet pre-trained features, ensuring essential features at different levels are retained. Further, a decoder grounded in a global context attention block is employed to foster global feature interaction and refine the predicted masks. Elsevier 2023-06-28 /pmc/articles/PMC10345258/ /pubmed/37456010 http://dx.doi.org/10.1016/j.heliyon.2023.e17647 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Research Article Zhang, Enguang Xie, Rixin Bian, Yuxin Wang, Jiayan Tao, Pengyi Zhang, Heng Jiang, Shenlu Cervical cell nuclei segmentation based on GC-UNet |
title | Cervical cell nuclei segmentation based on GC-UNet |
title_full | Cervical cell nuclei segmentation based on GC-UNet |
title_fullStr | Cervical cell nuclei segmentation based on GC-UNet |
title_full_unstemmed | Cervical cell nuclei segmentation based on GC-UNet |
title_short | Cervical cell nuclei segmentation based on GC-UNet |
title_sort | cervical cell nuclei segmentation based on gc-unet |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10345258/ https://www.ncbi.nlm.nih.gov/pubmed/37456010 http://dx.doi.org/10.1016/j.heliyon.2023.e17647 |
work_keys_str_mv | AT zhangenguang cervicalcellnucleisegmentationbasedongcunet AT xierixin cervicalcellnucleisegmentationbasedongcunet AT bianyuxin cervicalcellnucleisegmentationbasedongcunet AT wangjiayan cervicalcellnucleisegmentationbasedongcunet AT taopengyi cervicalcellnucleisegmentationbasedongcunet AT zhangheng cervicalcellnucleisegmentationbasedongcunet AT jiangshenlu cervicalcellnucleisegmentationbasedongcunet |