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A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors
Accelerated failure time (AFT) models are used widely in medical research, though to a much lesser extent than proportional hazards models. In an AFT model, the effect of covariates act to accelerate or decelerate the time to event of interest, that is, shorten or extend the time to event. Commonly...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10346080/ https://www.ncbi.nlm.nih.gov/pubmed/35639824 http://dx.doi.org/10.1093/biostatistics/kxac009 |
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author | Crowther, Michael J Royston, Patrick Clements, Mark |
author_facet | Crowther, Michael J Royston, Patrick Clements, Mark |
author_sort | Crowther, Michael J |
collection | PubMed |
description | Accelerated failure time (AFT) models are used widely in medical research, though to a much lesser extent than proportional hazards models. In an AFT model, the effect of covariates act to accelerate or decelerate the time to event of interest, that is, shorten or extend the time to event. Commonly used parametric AFT models are limited in the underlying shapes that they can capture. In this article, we propose a general parametric AFT model, and in particular concentrate on using restricted cubic splines to model the baseline to provide substantial flexibility. We then extend the model to accommodate time-dependent acceleration factors. Delayed entry is also allowed, and hence, time-dependent covariates. We evaluate the proposed model through simulation, showing substantial improvements compared to standard parametric AFT models. We also show analytically and through simulations that the AFT models are collapsible, suggesting that this model class will be well suited to causal inference. We illustrate the methods with a data set of patients with breast cancer. Finally, we provide highly efficient, user-friendly Stata, and R software packages. |
format | Online Article Text |
id | pubmed-10346080 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-103460802023-07-15 A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors Crowther, Michael J Royston, Patrick Clements, Mark Biostatistics Article Accelerated failure time (AFT) models are used widely in medical research, though to a much lesser extent than proportional hazards models. In an AFT model, the effect of covariates act to accelerate or decelerate the time to event of interest, that is, shorten or extend the time to event. Commonly used parametric AFT models are limited in the underlying shapes that they can capture. In this article, we propose a general parametric AFT model, and in particular concentrate on using restricted cubic splines to model the baseline to provide substantial flexibility. We then extend the model to accommodate time-dependent acceleration factors. Delayed entry is also allowed, and hence, time-dependent covariates. We evaluate the proposed model through simulation, showing substantial improvements compared to standard parametric AFT models. We also show analytically and through simulations that the AFT models are collapsible, suggesting that this model class will be well suited to causal inference. We illustrate the methods with a data set of patients with breast cancer. Finally, we provide highly efficient, user-friendly Stata, and R software packages. Oxford University Press 2022-05-26 /pmc/articles/PMC10346080/ /pubmed/35639824 http://dx.doi.org/10.1093/biostatistics/kxac009 Text en © The Author 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Article Crowther, Michael J Royston, Patrick Clements, Mark A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors |
title | A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors |
title_full | A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors |
title_fullStr | A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors |
title_full_unstemmed | A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors |
title_short | A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors |
title_sort | flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10346080/ https://www.ncbi.nlm.nih.gov/pubmed/35639824 http://dx.doi.org/10.1093/biostatistics/kxac009 |
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