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A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors

Accelerated failure time (AFT) models are used widely in medical research, though to a much lesser extent than proportional hazards models. In an AFT model, the effect of covariates act to accelerate or decelerate the time to event of interest, that is, shorten or extend the time to event. Commonly...

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Detalles Bibliográficos
Autores principales: Crowther, Michael J, Royston, Patrick, Clements, Mark
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10346080/
https://www.ncbi.nlm.nih.gov/pubmed/35639824
http://dx.doi.org/10.1093/biostatistics/kxac009
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author Crowther, Michael J
Royston, Patrick
Clements, Mark
author_facet Crowther, Michael J
Royston, Patrick
Clements, Mark
author_sort Crowther, Michael J
collection PubMed
description Accelerated failure time (AFT) models are used widely in medical research, though to a much lesser extent than proportional hazards models. In an AFT model, the effect of covariates act to accelerate or decelerate the time to event of interest, that is, shorten or extend the time to event. Commonly used parametric AFT models are limited in the underlying shapes that they can capture. In this article, we propose a general parametric AFT model, and in particular concentrate on using restricted cubic splines to model the baseline to provide substantial flexibility. We then extend the model to accommodate time-dependent acceleration factors. Delayed entry is also allowed, and hence, time-dependent covariates. We evaluate the proposed model through simulation, showing substantial improvements compared to standard parametric AFT models. We also show analytically and through simulations that the AFT models are collapsible, suggesting that this model class will be well suited to causal inference. We illustrate the methods with a data set of patients with breast cancer. Finally, we provide highly efficient, user-friendly Stata, and R software packages.
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spelling pubmed-103460802023-07-15 A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors Crowther, Michael J Royston, Patrick Clements, Mark Biostatistics Article Accelerated failure time (AFT) models are used widely in medical research, though to a much lesser extent than proportional hazards models. In an AFT model, the effect of covariates act to accelerate or decelerate the time to event of interest, that is, shorten or extend the time to event. Commonly used parametric AFT models are limited in the underlying shapes that they can capture. In this article, we propose a general parametric AFT model, and in particular concentrate on using restricted cubic splines to model the baseline to provide substantial flexibility. We then extend the model to accommodate time-dependent acceleration factors. Delayed entry is also allowed, and hence, time-dependent covariates. We evaluate the proposed model through simulation, showing substantial improvements compared to standard parametric AFT models. We also show analytically and through simulations that the AFT models are collapsible, suggesting that this model class will be well suited to causal inference. We illustrate the methods with a data set of patients with breast cancer. Finally, we provide highly efficient, user-friendly Stata, and R software packages. Oxford University Press 2022-05-26 /pmc/articles/PMC10346080/ /pubmed/35639824 http://dx.doi.org/10.1093/biostatistics/kxac009 Text en © The Author 2022. Published by Oxford University Press. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Article
Crowther, Michael J
Royston, Patrick
Clements, Mark
A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors
title A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors
title_full A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors
title_fullStr A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors
title_full_unstemmed A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors
title_short A flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors
title_sort flexible parametric accelerated failure time model and the extension to time-dependent acceleration factors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10346080/
https://www.ncbi.nlm.nih.gov/pubmed/35639824
http://dx.doi.org/10.1093/biostatistics/kxac009
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