Cargando…

MicroED structure of the human vasopressin 1B receptor

The small size and flexibility of G protein-coupled receptors (GPCRs) have long posed a significant challenge to determining their structures for research and therapeutic applications. Single particle cryogenic electron microscopy (cryoEM) is often out of reach due to the small size of the receptor...

Descripción completa

Detalles Bibliográficos
Autores principales: Shiriaeva, Anna, Martynowycz, Michael W., Nicolas, William J., Cherezov, Vadim, Gonen, Tamir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cold Spring Harbor Laboratory 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10350018/
https://www.ncbi.nlm.nih.gov/pubmed/37461729
http://dx.doi.org/10.1101/2023.07.05.547888
_version_ 1785074044925640704
author Shiriaeva, Anna
Martynowycz, Michael W.
Nicolas, William J.
Cherezov, Vadim
Gonen, Tamir
author_facet Shiriaeva, Anna
Martynowycz, Michael W.
Nicolas, William J.
Cherezov, Vadim
Gonen, Tamir
author_sort Shiriaeva, Anna
collection PubMed
description The small size and flexibility of G protein-coupled receptors (GPCRs) have long posed a significant challenge to determining their structures for research and therapeutic applications. Single particle cryogenic electron microscopy (cryoEM) is often out of reach due to the small size of the receptor without a signaling partner. Crystallization of GPCRs in lipidic cubic phase (LCP) often results in crystals that may be too small and difficult to analyze using X-ray microcrystallography at synchrotron sources or even serial femtosecond crystallography at X-ray free electron lasers. Here, we determine the previously unknown structure of the human vasopressin 1B receptor (V1BR) using microcrystal electron diffraction (MicroED). To achieve this, we grew V1BR microcrystals in LCP and transferred the material directly onto electron microscopy grids. The protein was labeled with a fluorescent dye prior to crystallization to locate the microcrystals using cryogenic fluorescence microscopy, and then the surrounding material was removed using a plasma-focused ion beam to thin the sample to a thickness amenable to MicroED. MicroED data from 14 crystalline lamellae were used to determine the 3.2 Å structure of the receptor in the crystallographic space group P 1. These results demonstrate the use of MicroED to determine previously unknown GPCR structures that, despite significant effort, were not tractable by other methods.
format Online
Article
Text
id pubmed-10350018
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Cold Spring Harbor Laboratory
record_format MEDLINE/PubMed
spelling pubmed-103500182023-07-17 MicroED structure of the human vasopressin 1B receptor Shiriaeva, Anna Martynowycz, Michael W. Nicolas, William J. Cherezov, Vadim Gonen, Tamir bioRxiv Article The small size and flexibility of G protein-coupled receptors (GPCRs) have long posed a significant challenge to determining their structures for research and therapeutic applications. Single particle cryogenic electron microscopy (cryoEM) is often out of reach due to the small size of the receptor without a signaling partner. Crystallization of GPCRs in lipidic cubic phase (LCP) often results in crystals that may be too small and difficult to analyze using X-ray microcrystallography at synchrotron sources or even serial femtosecond crystallography at X-ray free electron lasers. Here, we determine the previously unknown structure of the human vasopressin 1B receptor (V1BR) using microcrystal electron diffraction (MicroED). To achieve this, we grew V1BR microcrystals in LCP and transferred the material directly onto electron microscopy grids. The protein was labeled with a fluorescent dye prior to crystallization to locate the microcrystals using cryogenic fluorescence microscopy, and then the surrounding material was removed using a plasma-focused ion beam to thin the sample to a thickness amenable to MicroED. MicroED data from 14 crystalline lamellae were used to determine the 3.2 Å structure of the receptor in the crystallographic space group P 1. These results demonstrate the use of MicroED to determine previously unknown GPCR structures that, despite significant effort, were not tractable by other methods. Cold Spring Harbor Laboratory 2023-07-06 /pmc/articles/PMC10350018/ /pubmed/37461729 http://dx.doi.org/10.1101/2023.07.05.547888 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Shiriaeva, Anna
Martynowycz, Michael W.
Nicolas, William J.
Cherezov, Vadim
Gonen, Tamir
MicroED structure of the human vasopressin 1B receptor
title MicroED structure of the human vasopressin 1B receptor
title_full MicroED structure of the human vasopressin 1B receptor
title_fullStr MicroED structure of the human vasopressin 1B receptor
title_full_unstemmed MicroED structure of the human vasopressin 1B receptor
title_short MicroED structure of the human vasopressin 1B receptor
title_sort microed structure of the human vasopressin 1b receptor
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10350018/
https://www.ncbi.nlm.nih.gov/pubmed/37461729
http://dx.doi.org/10.1101/2023.07.05.547888
work_keys_str_mv AT shiriaevaanna microedstructureofthehumanvasopressin1breceptor
AT martynowyczmichaelw microedstructureofthehumanvasopressin1breceptor
AT nicolaswilliamj microedstructureofthehumanvasopressin1breceptor
AT cherezovvadim microedstructureofthehumanvasopressin1breceptor
AT gonentamir microedstructureofthehumanvasopressin1breceptor