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Exploration and Validation of Potential Biomarkers and Therapeutic Targets in Ferroptosis of Asthma

PURPOSE: Asthma is a chronic inflammatory airway disease involving multiple mechanisms, of which ferroptosis is a form of programmed cell death. Recent studies have shown that ferroptosis may play a crucial role in the pathogenesis of asthma, but no specific ferroptosis gene has been found in asthma...

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Autores principales: Xing, Yanqing, Feng, Liting, Dong, Yangdou, Li, Yupeng, Zhang, Lulu, Wu, Qiannan, Huo, Rujie, Dong, Yanting, Tian, Xinrui, Tian, Xinli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10350417/
https://www.ncbi.nlm.nih.gov/pubmed/37465372
http://dx.doi.org/10.2147/JAA.S416276
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author Xing, Yanqing
Feng, Liting
Dong, Yangdou
Li, Yupeng
Zhang, Lulu
Wu, Qiannan
Huo, Rujie
Dong, Yanting
Tian, Xinrui
Tian, Xinli
author_facet Xing, Yanqing
Feng, Liting
Dong, Yangdou
Li, Yupeng
Zhang, Lulu
Wu, Qiannan
Huo, Rujie
Dong, Yanting
Tian, Xinrui
Tian, Xinli
author_sort Xing, Yanqing
collection PubMed
description PURPOSE: Asthma is a chronic inflammatory airway disease involving multiple mechanisms, of which ferroptosis is a form of programmed cell death. Recent studies have shown that ferroptosis may play a crucial role in the pathogenesis of asthma, but no specific ferroptosis gene has been found in asthma, and the exact mechanism is still unclear. The present study aimed to screen ferroptosis genes associated with asthma and find therapeutic targets, in order to contribute a new clue for the diagnosis and therapy of asthma. METHODS: Ferroptosis-related differentially expressed genes (FR-DEGs) in asthma were selected by the GSE41861, GSE43696 and ferroptosis datasets. Next, the FR-DEGs were subjected by GO and KEGG enrichment, and the mRNA-miRNA network was constructed. Then, GSEA and GSVA enrichment analysis and Immune infiltration analysis were performed, followed by targeted drug prediction. Finally, the expression of FR-DEGs was confirmed using GSE63142 dataset and RT-PCR assay. RESULTS: We found 13 FR-DEGs by the GSE41861, GSE43696 and ferroptosis database. Functional enrichment analysis revealed that the 13 FR-DEGs were enriched in oxidative stress, immune response, ferroptosis, lysosome, necrosis, apoptosis etc. Moreover, our results revealed the mRNA-miRNA network of the FR-DEGs and identified candidate drugs. Also, immune infiltration revealed that ELAVL1, CREB5, CBR1 and NR1D2 are associated with the immune cells and may be potential targets in asthma. Finally, 10 FR-DEGs were validated by the GSE63142 database. It was verified that 7 FR-DEGs were differentially expressed by collecting asthma patients and healthy controls. CONCLUSION: This study ultimately identified 7 FR-DEGs for the diagnosis and therapy of asthma. These 7 FR-DEGs contribute to oxidative stress and immune responses. This study provides potential therapeutic targets and biomarkers for asthma patients, shedding further light on the pathogenesis of asthma as well as providing new insights into the treatment of asthma.
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spelling pubmed-103504172023-07-18 Exploration and Validation of Potential Biomarkers and Therapeutic Targets in Ferroptosis of Asthma Xing, Yanqing Feng, Liting Dong, Yangdou Li, Yupeng Zhang, Lulu Wu, Qiannan Huo, Rujie Dong, Yanting Tian, Xinrui Tian, Xinli J Asthma Allergy Original Research PURPOSE: Asthma is a chronic inflammatory airway disease involving multiple mechanisms, of which ferroptosis is a form of programmed cell death. Recent studies have shown that ferroptosis may play a crucial role in the pathogenesis of asthma, but no specific ferroptosis gene has been found in asthma, and the exact mechanism is still unclear. The present study aimed to screen ferroptosis genes associated with asthma and find therapeutic targets, in order to contribute a new clue for the diagnosis and therapy of asthma. METHODS: Ferroptosis-related differentially expressed genes (FR-DEGs) in asthma were selected by the GSE41861, GSE43696 and ferroptosis datasets. Next, the FR-DEGs were subjected by GO and KEGG enrichment, and the mRNA-miRNA network was constructed. Then, GSEA and GSVA enrichment analysis and Immune infiltration analysis were performed, followed by targeted drug prediction. Finally, the expression of FR-DEGs was confirmed using GSE63142 dataset and RT-PCR assay. RESULTS: We found 13 FR-DEGs by the GSE41861, GSE43696 and ferroptosis database. Functional enrichment analysis revealed that the 13 FR-DEGs were enriched in oxidative stress, immune response, ferroptosis, lysosome, necrosis, apoptosis etc. Moreover, our results revealed the mRNA-miRNA network of the FR-DEGs and identified candidate drugs. Also, immune infiltration revealed that ELAVL1, CREB5, CBR1 and NR1D2 are associated with the immune cells and may be potential targets in asthma. Finally, 10 FR-DEGs were validated by the GSE63142 database. It was verified that 7 FR-DEGs were differentially expressed by collecting asthma patients and healthy controls. CONCLUSION: This study ultimately identified 7 FR-DEGs for the diagnosis and therapy of asthma. These 7 FR-DEGs contribute to oxidative stress and immune responses. This study provides potential therapeutic targets and biomarkers for asthma patients, shedding further light on the pathogenesis of asthma as well as providing new insights into the treatment of asthma. Dove 2023-07-12 /pmc/articles/PMC10350417/ /pubmed/37465372 http://dx.doi.org/10.2147/JAA.S416276 Text en © 2023 Xing et al. https://creativecommons.org/licenses/by-nc/3.0/This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/ (https://creativecommons.org/licenses/by-nc/3.0/) ). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Xing, Yanqing
Feng, Liting
Dong, Yangdou
Li, Yupeng
Zhang, Lulu
Wu, Qiannan
Huo, Rujie
Dong, Yanting
Tian, Xinrui
Tian, Xinli
Exploration and Validation of Potential Biomarkers and Therapeutic Targets in Ferroptosis of Asthma
title Exploration and Validation of Potential Biomarkers and Therapeutic Targets in Ferroptosis of Asthma
title_full Exploration and Validation of Potential Biomarkers and Therapeutic Targets in Ferroptosis of Asthma
title_fullStr Exploration and Validation of Potential Biomarkers and Therapeutic Targets in Ferroptosis of Asthma
title_full_unstemmed Exploration and Validation of Potential Biomarkers and Therapeutic Targets in Ferroptosis of Asthma
title_short Exploration and Validation of Potential Biomarkers and Therapeutic Targets in Ferroptosis of Asthma
title_sort exploration and validation of potential biomarkers and therapeutic targets in ferroptosis of asthma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10350417/
https://www.ncbi.nlm.nih.gov/pubmed/37465372
http://dx.doi.org/10.2147/JAA.S416276
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