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Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer’s disease
INTRODUCTION: Alzheimer’s disease (AD) is a progressive and debilitating neurodegenerative disorder prevalent among older adults. Although AD symptoms can be managed through certain treatments, advancing the understanding of underlying disease mechanisms and developing effective therapies is critica...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10352499/ https://www.ncbi.nlm.nih.gov/pubmed/37470054 http://dx.doi.org/10.3389/fnmol.2023.1205541 |
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author | Ma, Wenhao Su, Yuelin Zhang, Peng Wan, Guoqing Cheng, Xiaoqin Lu, Changlian Gu, Xuefeng |
author_facet | Ma, Wenhao Su, Yuelin Zhang, Peng Wan, Guoqing Cheng, Xiaoqin Lu, Changlian Gu, Xuefeng |
author_sort | Ma, Wenhao |
collection | PubMed |
description | INTRODUCTION: Alzheimer’s disease (AD) is a progressive and debilitating neurodegenerative disorder prevalent among older adults. Although AD symptoms can be managed through certain treatments, advancing the understanding of underlying disease mechanisms and developing effective therapies is critical. METHODS: In this study, we systematically analyzed transcriptome data from temporal lobes of healthy individuals and patients with AD to investigate the relationship between AD and mitochondrial autophagy. Machine learning algorithms were used to identify six genes—FUNDC1, MAP1LC3A, CSNK2A1, VDAC1, CSNK2B, and ATG5—for the construction of an AD prediction model. Furthermore, AD was categorized into three subtypes through consensus clustering analysis. RESULTS: The identified genes are closely linked to the onset and progression of AD and can serve as reliable biomarkers. The differences in gene expression, clinical features, immune infiltration, and pathway enrichment were examined among the three AD subtypes. Potential drugs for the treatment of each subtype were also identified. DISCUSSION: The findings observed in the present study can help to deepen the understanding of the underlying disease mechanisms of AD and enable the development of precision medicine and personalized treatment approaches. |
format | Online Article Text |
id | pubmed-10352499 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103524992023-07-19 Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer’s disease Ma, Wenhao Su, Yuelin Zhang, Peng Wan, Guoqing Cheng, Xiaoqin Lu, Changlian Gu, Xuefeng Front Mol Neurosci Molecular Neuroscience INTRODUCTION: Alzheimer’s disease (AD) is a progressive and debilitating neurodegenerative disorder prevalent among older adults. Although AD symptoms can be managed through certain treatments, advancing the understanding of underlying disease mechanisms and developing effective therapies is critical. METHODS: In this study, we systematically analyzed transcriptome data from temporal lobes of healthy individuals and patients with AD to investigate the relationship between AD and mitochondrial autophagy. Machine learning algorithms were used to identify six genes—FUNDC1, MAP1LC3A, CSNK2A1, VDAC1, CSNK2B, and ATG5—for the construction of an AD prediction model. Furthermore, AD was categorized into three subtypes through consensus clustering analysis. RESULTS: The identified genes are closely linked to the onset and progression of AD and can serve as reliable biomarkers. The differences in gene expression, clinical features, immune infiltration, and pathway enrichment were examined among the three AD subtypes. Potential drugs for the treatment of each subtype were also identified. DISCUSSION: The findings observed in the present study can help to deepen the understanding of the underlying disease mechanisms of AD and enable the development of precision medicine and personalized treatment approaches. Frontiers Media S.A. 2023-07-04 /pmc/articles/PMC10352499/ /pubmed/37470054 http://dx.doi.org/10.3389/fnmol.2023.1205541 Text en Copyright © 2023 Ma, Su, Zhang, Wan, Cheng, Lu and Gu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Molecular Neuroscience Ma, Wenhao Su, Yuelin Zhang, Peng Wan, Guoqing Cheng, Xiaoqin Lu, Changlian Gu, Xuefeng Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer’s disease |
title | Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer’s disease |
title_full | Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer’s disease |
title_fullStr | Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer’s disease |
title_full_unstemmed | Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer’s disease |
title_short | Identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of Alzheimer’s disease |
title_sort | identification of mitochondrial-related genes as potential biomarkers for the subtyping and prediction of alzheimer’s disease |
topic | Molecular Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10352499/ https://www.ncbi.nlm.nih.gov/pubmed/37470054 http://dx.doi.org/10.3389/fnmol.2023.1205541 |
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