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SnakeWRAP: a Snakemake workflow to facilitate automated processing of metagenomic data through the metaWRAP pipeline

Generating high-quality genome assemblies of complex microbial populations from shotgun metagenomics data is often a manually intensive task involving many computational steps. SnakeWRAP is a novel tool, implemented in the Snakemake workflow language, to automate multiple metaWRAP modules. Specifica...

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Detalles Bibliográficos
Autores principales: Krapohl, John, Pickett, Brett E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000 Research Limited 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10352622/
https://www.ncbi.nlm.nih.gov/pubmed/37469625
http://dx.doi.org/10.12688/f1000research.108835.2

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