Genomic analyses of a widespread blueberry virus in the United States

Screening of blueberry accessions using high throughput sequencing revealed the presence of a new virus. Genomic structure and sequence are similar to that of nectarine stem pitting associated virus (NSPaV), a member of the genus Luteovirus, family Tombusviridae. The full genome of the new luteoviru...

Descripción completa

Detalles Bibliográficos
Autores principales: Stainton, Daisy, Villamor, Dan E.V., Sierra Mejia, Andrea, Srivastava, Ashish, Mollov, Dimitre, Martin, Robert R., Tzanetakis, Ioannis E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10352716/
https://www.ncbi.nlm.nih.gov/pubmed/37271421
http://dx.doi.org/10.1016/j.virusres.2023.199143
_version_ 1785074568017215488
author Stainton, Daisy
Villamor, Dan E.V.
Sierra Mejia, Andrea
Srivastava, Ashish
Mollov, Dimitre
Martin, Robert R.
Tzanetakis, Ioannis E.
author_facet Stainton, Daisy
Villamor, Dan E.V.
Sierra Mejia, Andrea
Srivastava, Ashish
Mollov, Dimitre
Martin, Robert R.
Tzanetakis, Ioannis E.
author_sort Stainton, Daisy
collection PubMed
description Screening of blueberry accessions using high throughput sequencing revealed the presence of a new virus. Genomic structure and sequence are similar to that of nectarine stem pitting associated virus (NSPaV), a member of the genus Luteovirus, family Tombusviridae. The full genome of the new luteovirus, tentatively named blueberry virus L (BlVL), was characterized and analyzed. Similar to NSPaV, BlVL does not contain readily identifiable movement proteins in any of the seven isolates sequenced. More than 600 samples collected from five states were screened and 79% were found infected, making BlVL the most widespread blueberry virus in the United States.
format Online
Article
Text
id pubmed-10352716
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-103527162023-07-19 Genomic analyses of a widespread blueberry virus in the United States Stainton, Daisy Villamor, Dan E.V. Sierra Mejia, Andrea Srivastava, Ashish Mollov, Dimitre Martin, Robert R. Tzanetakis, Ioannis E. Virus Res Article Screening of blueberry accessions using high throughput sequencing revealed the presence of a new virus. Genomic structure and sequence are similar to that of nectarine stem pitting associated virus (NSPaV), a member of the genus Luteovirus, family Tombusviridae. The full genome of the new luteovirus, tentatively named blueberry virus L (BlVL), was characterized and analyzed. Similar to NSPaV, BlVL does not contain readily identifiable movement proteins in any of the seven isolates sequenced. More than 600 samples collected from five states were screened and 79% were found infected, making BlVL the most widespread blueberry virus in the United States. Elsevier 2023-06-07 /pmc/articles/PMC10352716/ /pubmed/37271421 http://dx.doi.org/10.1016/j.virusres.2023.199143 Text en © 2023 The Authors. Published by Elsevier B.V. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Stainton, Daisy
Villamor, Dan E.V.
Sierra Mejia, Andrea
Srivastava, Ashish
Mollov, Dimitre
Martin, Robert R.
Tzanetakis, Ioannis E.
Genomic analyses of a widespread blueberry virus in the United States
title Genomic analyses of a widespread blueberry virus in the United States
title_full Genomic analyses of a widespread blueberry virus in the United States
title_fullStr Genomic analyses of a widespread blueberry virus in the United States
title_full_unstemmed Genomic analyses of a widespread blueberry virus in the United States
title_short Genomic analyses of a widespread blueberry virus in the United States
title_sort genomic analyses of a widespread blueberry virus in the united states
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10352716/
https://www.ncbi.nlm.nih.gov/pubmed/37271421
http://dx.doi.org/10.1016/j.virusres.2023.199143
work_keys_str_mv AT staintondaisy genomicanalysesofawidespreadblueberryvirusintheunitedstates
AT villamordanev genomicanalysesofawidespreadblueberryvirusintheunitedstates
AT sierramejiaandrea genomicanalysesofawidespreadblueberryvirusintheunitedstates
AT srivastavaashish genomicanalysesofawidespreadblueberryvirusintheunitedstates
AT mollovdimitre genomicanalysesofawidespreadblueberryvirusintheunitedstates
AT martinrobertr genomicanalysesofawidespreadblueberryvirusintheunitedstates
AT tzanetakisioannise genomicanalysesofawidespreadblueberryvirusintheunitedstates

Ejemplares similares