Sphingopyxis Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works

Three strains isolated by geosmin enrichment from a sand filter in an Australian drinking water treatment works were genome sequenced to identify their taxonomic placement, and a bench-scale batch experiment confirmed their geosmin-degrading capability. Using the average nucleotide identity based on...

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Autores principales: Smith, Holly-Anne B., Mullins, Alex J., Webster, Gordon, Sapsford, Devin, Gaskin, Paul, Monis, Paul T., Hoefel, Daniel, Saint, Christopher P., Weightman, Andrew J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2023
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10353388/
https://www.ncbi.nlm.nih.gov/pubmed/37341619
http://dx.doi.org/10.1128/mra.00249-23
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author Smith, Holly-Anne B.
Mullins, Alex J.
Webster, Gordon
Sapsford, Devin
Gaskin, Paul
Monis, Paul T.
Hoefel, Daniel
Saint, Christopher P.
Weightman, Andrew J.
author_facet Smith, Holly-Anne B.
Mullins, Alex J.
Webster, Gordon
Sapsford, Devin
Gaskin, Paul
Monis, Paul T.
Hoefel, Daniel
Saint, Christopher P.
Weightman, Andrew J.
author_sort Smith, Holly-Anne B.
collection PubMed
description Three strains isolated by geosmin enrichment from a sand filter in an Australian drinking water treatment works were genome sequenced to identify their taxonomic placement, and a bench-scale batch experiment confirmed their geosmin-degrading capability. Using the average nucleotide identity based on the MUMmer algorithm (ANIm), pairwise digital DNA-DNA hybridization (dDDH), and phylogenomic analyses, the strains were identified as Sphingopyxis species.
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spelling pubmed-103533882023-07-19 Sphingopyxis Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works Smith, Holly-Anne B. Mullins, Alex J. Webster, Gordon Sapsford, Devin Gaskin, Paul Monis, Paul T. Hoefel, Daniel Saint, Christopher P. Weightman, Andrew J. Microbiol Resour Announc Genome Sequences Three strains isolated by geosmin enrichment from a sand filter in an Australian drinking water treatment works were genome sequenced to identify their taxonomic placement, and a bench-scale batch experiment confirmed their geosmin-degrading capability. Using the average nucleotide identity based on the MUMmer algorithm (ANIm), pairwise digital DNA-DNA hybridization (dDDH), and phylogenomic analyses, the strains were identified as Sphingopyxis species. American Society for Microbiology 2023-06-21 /pmc/articles/PMC10353388/ /pubmed/37341619 http://dx.doi.org/10.1128/mra.00249-23 Text en Copyright © 2023 Smith et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Smith, Holly-Anne B.
Mullins, Alex J.
Webster, Gordon
Sapsford, Devin
Gaskin, Paul
Monis, Paul T.
Hoefel, Daniel
Saint, Christopher P.
Weightman, Andrew J.
Sphingopyxis Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works
title Sphingopyxis Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works
title_full Sphingopyxis Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works
title_fullStr Sphingopyxis Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works
title_full_unstemmed Sphingopyxis Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works
title_short Sphingopyxis Species Isolated from Sand Filter Biofilm at an Australian Drinking Water Treatment Works
title_sort sphingopyxis species isolated from sand filter biofilm at an australian drinking water treatment works
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10353388/
https://www.ncbi.nlm.nih.gov/pubmed/37341619
http://dx.doi.org/10.1128/mra.00249-23
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