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Label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein E knockout mouse model using surface‐enhanced Raman spectroscopy validated by machine learning algorithm
The direct preventative detection of flow‐induced atherosclerosis remains a significant challenge, impeding the development of early treatments and prevention measures. This study proposes a method for diagnosing atherosclerosis in the carotid artery using nanometer biomarker measurements through su...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley & Sons, Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10354754/ https://www.ncbi.nlm.nih.gov/pubmed/37476064 http://dx.doi.org/10.1002/btm2.10529 |
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author | Lee, Sanghwa Jue, Miyeon Cho, Minju Lee, Kwanhee Paulson, Bjorn Jo, Hanjoong Song, Joon Seon Kang, Soo‐Jin Kim, Jun Ki |
author_facet | Lee, Sanghwa Jue, Miyeon Cho, Minju Lee, Kwanhee Paulson, Bjorn Jo, Hanjoong Song, Joon Seon Kang, Soo‐Jin Kim, Jun Ki |
author_sort | Lee, Sanghwa |
collection | PubMed |
description | The direct preventative detection of flow‐induced atherosclerosis remains a significant challenge, impeding the development of early treatments and prevention measures. This study proposes a method for diagnosing atherosclerosis in the carotid artery using nanometer biomarker measurements through surface‐enhanced Raman spectroscopy (SERS) from single‐drop blood samples. Atherosclerotic acceleration is induced in apolipoprotein E knockout mice which underwent a partial carotid ligation and were fed a high‐fat diet to rapidly induce disturbed flow‐induced atherosclerosis in the left common carotid artery while using the unligated, contralateral right carotid artery as control. The progressive atherosclerosis development of the left carotid artery was verified by micro‐magnetic resonance imaging (micro‐MRI) and histology in comparison to the right carotid artery. Single‐drop blood samples are deposited on chips of gold‐coated ZnO nanorods grown on silicon wafers that filter the nanometer markers and provide strong SERS signals. A diagnostic classifier was established based on principal component analysis (PCA), which separates the resultant spectra into the atherosclerotic and control groups. Scoring based on the principal components enabled the classification of samples into control, mild, and severe atherosclerotic disease. The PCA‐based analysis was validated against an independent test sample and compared against the PCA‐PLS‐DA machine learning algorithm which is known for applicability to Raman diagnosis. The accuracy of the PCA modification‐based diagnostic criteria was 94.5%, and that of the machine learning algorithm 97.5%. Using a mouse model, this study demonstrates that diagnosing and classifying the severity of atherosclerosis is possible using a single blood drop, SERS technology, and machine learning algorithm, indicating the detectability of biomarkers and vascular factors in the blood which correlate with the early stages of atherosclerosis development. |
format | Online Article Text |
id | pubmed-10354754 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | John Wiley & Sons, Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103547542023-07-20 Label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein E knockout mouse model using surface‐enhanced Raman spectroscopy validated by machine learning algorithm Lee, Sanghwa Jue, Miyeon Cho, Minju Lee, Kwanhee Paulson, Bjorn Jo, Hanjoong Song, Joon Seon Kang, Soo‐Jin Kim, Jun Ki Bioeng Transl Med Research Articles The direct preventative detection of flow‐induced atherosclerosis remains a significant challenge, impeding the development of early treatments and prevention measures. This study proposes a method for diagnosing atherosclerosis in the carotid artery using nanometer biomarker measurements through surface‐enhanced Raman spectroscopy (SERS) from single‐drop blood samples. Atherosclerotic acceleration is induced in apolipoprotein E knockout mice which underwent a partial carotid ligation and were fed a high‐fat diet to rapidly induce disturbed flow‐induced atherosclerosis in the left common carotid artery while using the unligated, contralateral right carotid artery as control. The progressive atherosclerosis development of the left carotid artery was verified by micro‐magnetic resonance imaging (micro‐MRI) and histology in comparison to the right carotid artery. Single‐drop blood samples are deposited on chips of gold‐coated ZnO nanorods grown on silicon wafers that filter the nanometer markers and provide strong SERS signals. A diagnostic classifier was established based on principal component analysis (PCA), which separates the resultant spectra into the atherosclerotic and control groups. Scoring based on the principal components enabled the classification of samples into control, mild, and severe atherosclerotic disease. The PCA‐based analysis was validated against an independent test sample and compared against the PCA‐PLS‐DA machine learning algorithm which is known for applicability to Raman diagnosis. The accuracy of the PCA modification‐based diagnostic criteria was 94.5%, and that of the machine learning algorithm 97.5%. Using a mouse model, this study demonstrates that diagnosing and classifying the severity of atherosclerosis is possible using a single blood drop, SERS technology, and machine learning algorithm, indicating the detectability of biomarkers and vascular factors in the blood which correlate with the early stages of atherosclerosis development. John Wiley & Sons, Inc. 2023-05-03 /pmc/articles/PMC10354754/ /pubmed/37476064 http://dx.doi.org/10.1002/btm2.10529 Text en © 2023 The Authors. Bioengineering & Translational Medicine published by Wiley Periodicals LLC on behalf of American Institute of Chemical Engineers. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Articles Lee, Sanghwa Jue, Miyeon Cho, Minju Lee, Kwanhee Paulson, Bjorn Jo, Hanjoong Song, Joon Seon Kang, Soo‐Jin Kim, Jun Ki Label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein E knockout mouse model using surface‐enhanced Raman spectroscopy validated by machine learning algorithm |
title | Label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein E knockout mouse model using surface‐enhanced Raman spectroscopy validated by machine learning algorithm |
title_full | Label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein E knockout mouse model using surface‐enhanced Raman spectroscopy validated by machine learning algorithm |
title_fullStr | Label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein E knockout mouse model using surface‐enhanced Raman spectroscopy validated by machine learning algorithm |
title_full_unstemmed | Label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein E knockout mouse model using surface‐enhanced Raman spectroscopy validated by machine learning algorithm |
title_short | Label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein E knockout mouse model using surface‐enhanced Raman spectroscopy validated by machine learning algorithm |
title_sort | label‐free atherosclerosis diagnosis through a blood drop of apolipoprotein e knockout mouse model using surface‐enhanced raman spectroscopy validated by machine learning algorithm |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10354754/ https://www.ncbi.nlm.nih.gov/pubmed/37476064 http://dx.doi.org/10.1002/btm2.10529 |
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