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Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses
Heat shock transcription factors (Hsfs) play important roles in plant developmental regulations and various stress responses. In present study, 46 Hsf genes in peanut (AhHsf) were identified and analyzed. The 46 AhHsf genes were classed into three groups (A, B, and C) and 14 subgroups (A1-A9, B1-B4,...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10355374/ https://www.ncbi.nlm.nih.gov/pubmed/37476167 http://dx.doi.org/10.3389/fpls.2023.1214732 |
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author | Wang, Qi Zhang, Zhenbiao Guo, Cun Zhao, Xiaobo Li, Zhiyuan Mou, Yifei Sun, Quanxi Wang, Juan Yuan, Cuiling Li, Chunjuan Cong, Ping Shan, Shihua |
author_facet | Wang, Qi Zhang, Zhenbiao Guo, Cun Zhao, Xiaobo Li, Zhiyuan Mou, Yifei Sun, Quanxi Wang, Juan Yuan, Cuiling Li, Chunjuan Cong, Ping Shan, Shihua |
author_sort | Wang, Qi |
collection | PubMed |
description | Heat shock transcription factors (Hsfs) play important roles in plant developmental regulations and various stress responses. In present study, 46 Hsf genes in peanut (AhHsf) were identified and analyzed. The 46 AhHsf genes were classed into three groups (A, B, and C) and 14 subgroups (A1-A9, B1-B4, and C1) together with their Arabidopsis homologs according to phylogenetic analyses, and 46 AhHsf genes unequally located on 17 chromosomes. Gene structure and protein motif analysis revealed that members from the same subgroup possessed similar exon/intron and motif organization, further supporting the results of phylogenetic analyses. Gene duplication events were found in peanut Hsf gene family via syntenic analysis, which were important in Hsf gene family expansion in peanut. The expression of AhHsf genes were detected in different tissues using published data, implying that AhHsf genes may differ in function. In addition, several AhHsf genes (AhHsf5, AhHsf11, AhHsf20, AhHsf24, AhHsf30, AhHsf35) were induced by drought and salt stresses. Furthermore, the stress-induced member AhHsf20 was found to be located in nucleus. Notably, overexpression of AhHsf20 was able to enhance salt tolerance. These results from this study may provide valuable information for further functional analysis of peanut Hsf genes. |
format | Online Article Text |
id | pubmed-10355374 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103553742023-07-20 Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses Wang, Qi Zhang, Zhenbiao Guo, Cun Zhao, Xiaobo Li, Zhiyuan Mou, Yifei Sun, Quanxi Wang, Juan Yuan, Cuiling Li, Chunjuan Cong, Ping Shan, Shihua Front Plant Sci Plant Science Heat shock transcription factors (Hsfs) play important roles in plant developmental regulations and various stress responses. In present study, 46 Hsf genes in peanut (AhHsf) were identified and analyzed. The 46 AhHsf genes were classed into three groups (A, B, and C) and 14 subgroups (A1-A9, B1-B4, and C1) together with their Arabidopsis homologs according to phylogenetic analyses, and 46 AhHsf genes unequally located on 17 chromosomes. Gene structure and protein motif analysis revealed that members from the same subgroup possessed similar exon/intron and motif organization, further supporting the results of phylogenetic analyses. Gene duplication events were found in peanut Hsf gene family via syntenic analysis, which were important in Hsf gene family expansion in peanut. The expression of AhHsf genes were detected in different tissues using published data, implying that AhHsf genes may differ in function. In addition, several AhHsf genes (AhHsf5, AhHsf11, AhHsf20, AhHsf24, AhHsf30, AhHsf35) were induced by drought and salt stresses. Furthermore, the stress-induced member AhHsf20 was found to be located in nucleus. Notably, overexpression of AhHsf20 was able to enhance salt tolerance. These results from this study may provide valuable information for further functional analysis of peanut Hsf genes. Frontiers Media S.A. 2023-07-05 /pmc/articles/PMC10355374/ /pubmed/37476167 http://dx.doi.org/10.3389/fpls.2023.1214732 Text en Copyright © 2023 Wang, Zhang, Guo, Zhao, Li, Mou, Sun, Wang, Yuan, Li, Cong and Shan https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Wang, Qi Zhang, Zhenbiao Guo, Cun Zhao, Xiaobo Li, Zhiyuan Mou, Yifei Sun, Quanxi Wang, Juan Yuan, Cuiling Li, Chunjuan Cong, Ping Shan, Shihua Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses |
title | Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses |
title_full | Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses |
title_fullStr | Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses |
title_full_unstemmed | Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses |
title_short | Hsf transcription factor gene family in peanut (Arachis hypogaea L.): genome-wide characterization and expression analysis under drought and salt stresses |
title_sort | hsf transcription factor gene family in peanut (arachis hypogaea l.): genome-wide characterization and expression analysis under drought and salt stresses |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10355374/ https://www.ncbi.nlm.nih.gov/pubmed/37476167 http://dx.doi.org/10.3389/fpls.2023.1214732 |
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