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A framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ECG
Arrhythmia detection from ECG is an important area of computational ECG analysis. However, although a large number of public ECG recordings are available, most research uses only few datasets, making it difficult to estimate the generalizability of the plethora of ECG classification methods. Further...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10356811/ https://www.ncbi.nlm.nih.gov/pubmed/37468574 http://dx.doi.org/10.1038/s41598-023-38532-9 |
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author | Merdjanovska, Elena Rashkovska, Aleksandra |
author_facet | Merdjanovska, Elena Rashkovska, Aleksandra |
author_sort | Merdjanovska, Elena |
collection | PubMed |
description | Arrhythmia detection from ECG is an important area of computational ECG analysis. However, although a large number of public ECG recordings are available, most research uses only few datasets, making it difficult to estimate the generalizability of the plethora of ECG classification methods. Furthermore, there is a large variability in the evaluation procedures, as well as lack of insight into whether they could successfully perform in a real-world setup. To address these problems, we propose an open-source, flexible and configurable ECG classification codebase—ECGDL, as one of the first efforts that includes 9 arrhythmia datasets, covering a large number of both morphological and rhythmic arrhythmias, as well as 4 deep neural networks, 4 segmentation techniques and 4 evaluation schemes. We perform a comparative analysis along these framework components to provide a comprehensive perspective into arrhythmia classification, focusing on single-lead ECG as the most recent trend in wireless ECG monitoring. ECGDL unifies the class information representation in datasets by creating a label dictionary. Furthermore, it includes a set of the best-performing deep learning approaches with varying signal segmentation techniques and network architectures. A novel evaluation scheme, inter-patient cross-validation, has also been proposed to perform fair evaluation and comparison of results. |
format | Online Article Text |
id | pubmed-10356811 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-103568112023-07-21 A framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ECG Merdjanovska, Elena Rashkovska, Aleksandra Sci Rep Article Arrhythmia detection from ECG is an important area of computational ECG analysis. However, although a large number of public ECG recordings are available, most research uses only few datasets, making it difficult to estimate the generalizability of the plethora of ECG classification methods. Furthermore, there is a large variability in the evaluation procedures, as well as lack of insight into whether they could successfully perform in a real-world setup. To address these problems, we propose an open-source, flexible and configurable ECG classification codebase—ECGDL, as one of the first efforts that includes 9 arrhythmia datasets, covering a large number of both morphological and rhythmic arrhythmias, as well as 4 deep neural networks, 4 segmentation techniques and 4 evaluation schemes. We perform a comparative analysis along these framework components to provide a comprehensive perspective into arrhythmia classification, focusing on single-lead ECG as the most recent trend in wireless ECG monitoring. ECGDL unifies the class information representation in datasets by creating a label dictionary. Furthermore, it includes a set of the best-performing deep learning approaches with varying signal segmentation techniques and network architectures. A novel evaluation scheme, inter-patient cross-validation, has also been proposed to perform fair evaluation and comparison of results. Nature Publishing Group UK 2023-07-19 /pmc/articles/PMC10356811/ /pubmed/37468574 http://dx.doi.org/10.1038/s41598-023-38532-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Merdjanovska, Elena Rashkovska, Aleksandra A framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ECG |
title | A framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ECG |
title_full | A framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ECG |
title_fullStr | A framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ECG |
title_full_unstemmed | A framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ECG |
title_short | A framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ECG |
title_sort | framework for comparative study of databases and computational methods for arrhythmia detection from single-lead ecg |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10356811/ https://www.ncbi.nlm.nih.gov/pubmed/37468574 http://dx.doi.org/10.1038/s41598-023-38532-9 |
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