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Nomogram for Early Prediction of Parkinson’s Disease Based on microRNA Profiles and Clinical Variables

BACKGROUND: Few efficient and simple models for the early prediction of Parkinson’s disease (PD) exists. OBJECTIVE: To develop and validate a novel nomogram for early identification of PD by incorporating microRNA (miRNA) expression profiles and clinical indicators. METHODS: Expression levels of blo...

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Autores principales: Hou, Xiangqing, Wong, Garry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: IOS Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10357140/
https://www.ncbi.nlm.nih.gov/pubmed/37212072
http://dx.doi.org/10.3233/JPD-225080
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author Hou, Xiangqing
Wong, Garry
author_facet Hou, Xiangqing
Wong, Garry
author_sort Hou, Xiangqing
collection PubMed
description BACKGROUND: Few efficient and simple models for the early prediction of Parkinson’s disease (PD) exists. OBJECTIVE: To develop and validate a novel nomogram for early identification of PD by incorporating microRNA (miRNA) expression profiles and clinical indicators. METHODS: Expression levels of blood-based miRNAs and clinical variables from 1,284 individuals were downloaded from the Parkinson’s Progression Marker Initiative database on June 1, 2022. Initially, the generalized estimating equation was used to screen candidate biomarkers of PD progression in the discovery phase. Then, the elastic net model was utilized for variable selection and a logistics regression model was constructed to establish a nomogram. Additionally, the receiver operating characteristic (ROC) curves, decision curve analysis (DCA), and calibration curves were utilized to evaluate the performance of the nomogram. RESULTS: An accurate and externally validated nomogram was constructed for predicting prodromal and early PD. The nomogram is easy to utilize in a clinical setting since it consists of age, gender, education level, and transcriptional score (calculated by 10 miRNA profiles). Compared with the independent clinical model or 10 miRNA panel separately, the nomogram was reliable and satisfactory because the area under the ROC curve achieved 0.72 (95% confidence interval, 0.68-0.77) and obtained a superior clinical net benefit in DCA based on external datasets. Moreover, calibration curves also revealed its excellent prediction power. CONCLUSION: The constructed nomogram has potential for large-scale early screening of PD based upon its utility and precision.
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spelling pubmed-103571402023-07-21 Nomogram for Early Prediction of Parkinson’s Disease Based on microRNA Profiles and Clinical Variables Hou, Xiangqing Wong, Garry J Parkinsons Dis Research Report BACKGROUND: Few efficient and simple models for the early prediction of Parkinson’s disease (PD) exists. OBJECTIVE: To develop and validate a novel nomogram for early identification of PD by incorporating microRNA (miRNA) expression profiles and clinical indicators. METHODS: Expression levels of blood-based miRNAs and clinical variables from 1,284 individuals were downloaded from the Parkinson’s Progression Marker Initiative database on June 1, 2022. Initially, the generalized estimating equation was used to screen candidate biomarkers of PD progression in the discovery phase. Then, the elastic net model was utilized for variable selection and a logistics regression model was constructed to establish a nomogram. Additionally, the receiver operating characteristic (ROC) curves, decision curve analysis (DCA), and calibration curves were utilized to evaluate the performance of the nomogram. RESULTS: An accurate and externally validated nomogram was constructed for predicting prodromal and early PD. The nomogram is easy to utilize in a clinical setting since it consists of age, gender, education level, and transcriptional score (calculated by 10 miRNA profiles). Compared with the independent clinical model or 10 miRNA panel separately, the nomogram was reliable and satisfactory because the area under the ROC curve achieved 0.72 (95% confidence interval, 0.68-0.77) and obtained a superior clinical net benefit in DCA based on external datasets. Moreover, calibration curves also revealed its excellent prediction power. CONCLUSION: The constructed nomogram has potential for large-scale early screening of PD based upon its utility and precision. IOS Press 2023-06-13 /pmc/articles/PMC10357140/ /pubmed/37212072 http://dx.doi.org/10.3233/JPD-225080 Text en © 2023 – The authors. Published by IOS Press https://creativecommons.org/licenses/by-nc/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution Non-Commercial (CC BY-NC 4.0) License (https://creativecommons.org/licenses/by-nc/4.0/) , which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Report
Hou, Xiangqing
Wong, Garry
Nomogram for Early Prediction of Parkinson’s Disease Based on microRNA Profiles and Clinical Variables
title Nomogram for Early Prediction of Parkinson’s Disease Based on microRNA Profiles and Clinical Variables
title_full Nomogram for Early Prediction of Parkinson’s Disease Based on microRNA Profiles and Clinical Variables
title_fullStr Nomogram for Early Prediction of Parkinson’s Disease Based on microRNA Profiles and Clinical Variables
title_full_unstemmed Nomogram for Early Prediction of Parkinson’s Disease Based on microRNA Profiles and Clinical Variables
title_short Nomogram for Early Prediction of Parkinson’s Disease Based on microRNA Profiles and Clinical Variables
title_sort nomogram for early prediction of parkinson’s disease based on microrna profiles and clinical variables
topic Research Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10357140/
https://www.ncbi.nlm.nih.gov/pubmed/37212072
http://dx.doi.org/10.3233/JPD-225080
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